RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 MAGEB5Q9BZ81 275 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 AIPL1Q9NZN9 384 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 RICTORQ6R327 1708 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 DISP2A7MBM2 1401 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 INSRRP14616 1297 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 OTUD4Q01804 1114 aaKnown RBP14.85□□□□□ -0.03
GABRB3-219ENST00000636466 FSCBQ5H9T9 825 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 WDR93Q6P2C0 686 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 MIB1Q86YT6 1006 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.85□□□□□ -0.03
GABRB3-219ENST00000636466 A1CFQ9NQ94 594 aaKnown RBP14.85□□□□□ -0.03
GABRB3-219ENST00000636466 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.85□□□□□ -0.03
GABRB3-219ENST00000636466 TRIM49D1C9J1S8 452 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 FAM153BP0C7A2 387 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 KRT4P19013 534 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 DLG4P78352 724 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 FUT2Q10981 343 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 FAM153CQ494X1 144 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 FAM136AQ96C01 138 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 KIAA1683Q9H0B3 1180 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 FAM153AQ9UHL3 310 aa14.85□□□□□ -0.03
GABRB3-219ENST00000636466 H3BRB1 525 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 CETPP11597 493 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 TMEM119Q4V9L6 283 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 MEI1Q5TIA1 1274 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 PARP9Q8IXQ6 854 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 LRRC34Q8IZ02 419 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 IL31RAQ8NI17 732 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 CEP41Q9BYV8 373 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 TUT1Q9H6E5 874 aaKnown RBP14.84□□□□□ -0.03
GABRB3-219ENST00000636466 SENP1Q9P0U3 644 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 KIF3CO14782 793 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 CD4P01730 458 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 TM4SF1P30408 202 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 PGM1P36871 562 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 STX3Q13277 289 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 STILQ15468 1287 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ICE2Q659A1 982 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 GLB1LQ6UWU2 654 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 MOB2Q70IA6 237 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ARMC2Q8NEN0 867 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 STOML1Q9UBI4 398 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 FAF1Q9UNN5 650 aaPredicted RBP14.84□□□□□ -0.03
GABRB3-219ENST00000636466 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 KYAT1Q16773 422 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 LRIG3Q6UXM1 1119 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 SYDE1Q6ZW31 735 aaPredicted RBP14.84□□□□□ -0.03
GABRB3-219ENST00000636466 IFNEQ86WN2 208 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ATPAF2Q8N5M1 289 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 TRIM4Q9C037 500 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 C20orf96Q9NUD7 363 aaPredicted RBP14.84□□□□□ -0.03
GABRB3-219ENST00000636466 PIH1D1Q9NWS0 290 aaKnown RBP14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ANKRD63C9JTQ0 380 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 GARTP22102 1010 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 THPOP40225 353 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 LAMTOR4Q0VGL1 99 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ANKRD20A4Q4UJ75 823 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ANKRD20A8PQ5CZ79 823 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ANKRD20A2Q5SQ80 823 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ANKRD20A1Q5TYW2 823 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 AADACL2Q6P093 401 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 MPZL3Q6UWV2 235 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ZNF677Q86XU0 584 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 PTPRN2Q92932 1015 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 ZCWPW1Q9H0M4 648 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 PAK5Q9P286 719 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 SLC8A2Q9UPR5 921 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 SLC4A7Q9Y6M7 1214 aa14.84□□□□□ -0.03
GABRB3-219ENST00000636466 RNF103-CHMP3A0A140T963 221 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 KLRC4O43908 158 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 TAF6P49848 677 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 PTGISQ16647 500 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 ZNF606Q8WXB4 792 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 OPTNQ96CV9 577 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 FAM111AQ96PZ2 611 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 TRPV6Q9H1D0 765 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 TASP1Q9H6P5 420 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 PDE2AO00408 941 aaPredicted RBP14.83□□□□□ -0.04
GABRB3-219ENST00000636466 SASH3O75995 380 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 VIL1P09327 827 aaKnown RBP14.83□□□□□ -0.04
GABRB3-219ENST00000636466 FAM200BP0CF97 657 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 IRF1P10914 325 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 PPP3CAQ08209 521 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 ARID3BQ8IVW6 561 aaPredicted RBP14.83□□□□□ -0.04
GABRB3-219ENST00000636466 KCTD17Q8N5Z5 321 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 CDC42EP4Q9H3Q1 356 aaKnown RBP14.83□□□□□ -0.04
GABRB3-219ENST00000636466 SMG5Q9UPR3 1016 aaKnown RBP14.83□□□□□ -0.04
GABRB3-219ENST00000636466 RCCD1A6NED2 376 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 RNF225M0QZC1 329 aaPredicted RBP14.83□□□□□ -0.04
GABRB3-219ENST00000636466 TRAPPC3O43617 180 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 PYGMP11217 842 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 GZMAP12544 262 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 TRPM8Q7Z2W7 1104 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 WWP1Q9H0M0 922 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 SIGLEC1Q9BZZ2 1709 aa14.83□□□□□ -0.04
GABRB3-219ENST00000636466 ATP9AO75110 1047 aa14.82□□□□□ -0.04
GABRB3-219ENST00000636466 AP1G2O75843 785 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms