RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 LNP1A1A4G5 178 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 F11P03951 625 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 HAPLN1P10915 354 aaPredicted RBP21.76■■□□□ 1.07
TARDBP-228ENST00000629725 U2AF2P26368 475 aaKnown RBP eCLIP21.76■■□□□ 1.073e-10■□□□□ 10
TARDBP-228ENST00000629725 GBP1P32455 592 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 GJA4P35212 333 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 SLC12A3P55017 1021 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 COL9A2Q14055 689 aaPredicted RBP21.76■■□□□ 1.07
TARDBP-228ENST00000629725 PDGFRLQ15198 375 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 HYIQ5T013 277 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 SH3PXD2AQ5TCZ1 1133 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 TXNDC8Q6A555 127 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 LRRTM3Q86VH5 581 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 KCTD17Q8N5Z5 321 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 FAM184AQ8NB25 1140 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 TBX20Q9UMR3 447 aa21.76■■□□□ 1.07
TARDBP-228ENST00000629725 DMXL2Q8TDJ6 3036 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 NPHP3-ACAD11A0A0J9YXS1 232 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 ANO9A1A5B4 782 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 SOBPA7XYQ1 873 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 CYB561D2O14569 222 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 NFICP08651 508 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 HMGA1P17096 107 aaKnown RBP21.75■■□□□ 1.07
TARDBP-228ENST00000629725 DMC1Q14565 340 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 TMEM132DQ14C87 1099 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 NAIF1Q69YI7 327 aaPredicted RBP21.75■■□□□ 1.07
TARDBP-228ENST00000629725 RIN3Q8TB24 985 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 MRPS31Q92665 395 aaKnown RBP21.75■■□□□ 1.07
TARDBP-228ENST00000629725 KCNN1Q92952 543 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 ACDQ96AP0 544 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 PLIN2Q99541 437 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 PYM1Q9BRP8 204 aaKnown RBP21.75■■□□□ 1.07
TARDBP-228ENST00000629725 MSTO1Q9BUK6 570 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 CPSF3Q9UKF6 684 aaKnown RBP21.75■■□□□ 1.07
TARDBP-228ENST00000629725 LIMCH1Q9UPQ0 1083 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 DERAQ9Y315 318 aa21.75■■□□□ 1.07
TARDBP-228ENST00000629725 ZFYVE26Q68DK2 2539 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 A0A0B4J269 797 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 PIGRP01833 764 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 PLA2G4BP0C869 781 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 DGKEP52429 567 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 HMGN5P82970 282 aaKnown RBP21.74■■□□□ 1.07
TARDBP-228ENST00000629725 PSMD2Q13200 908 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 ZNF268Q14587 947 aaPredicted RBP21.74■■□□□ 1.07
TARDBP-228ENST00000629725 CPA6Q8N4T0 437 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 PNMA5Q96PV4 448 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 ADAM33Q9BZ11 813 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 ECT2Q9H8V3 914 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 MAGED2Q9UNF1 606 aaPredicted RBP21.74■■□□□ 1.07
TARDBP-228ENST00000629725 WASF3Q9UPY6 502 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 LAMA5O15230 3695 aa21.74■■□□□ 1.07
TARDBP-228ENST00000629725 KHNYNO15037 678 aaKnown RBP21.73■■□□□ 1.07
TARDBP-228ENST00000629725 CEACAM1P13688 526 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 SPINK2P20155 84 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 TAF6P49848 677 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 ARSHQ5FYA8 562 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 MON1AQ86VX9 555 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 DCP1BQ8IZD4 617 aaKnown RBP21.73■■□□□ 1.07
TARDBP-228ENST00000629725 CD101Q93033 1021 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 CDK5RAP3Q96JB5 506 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 TMEM9BQ9NQ34 198 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 PCDHB5Q9Y5E4 795 aa21.73■■□□□ 1.07
TARDBP-228ENST00000629725 K7ENM7 598 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 CSH1P0DML2 217 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 CSH2P0DML3 217 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 SCP2P22307 547 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 MTF1Q14872 753 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 USP39Q53GS9 565 aaKnown RBP21.72■■□□□ 1.07
TARDBP-228ENST00000629725 WSCD1Q658N2 575 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 PMS2CLQ68D20 193 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 C11orf74Q86VG3 221 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 OSCP1Q8WVF1 389 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 EZH1Q92800 747 aaPredicted RBP21.72■■□□□ 1.07
TARDBP-228ENST00000629725 ASB7Q9H672 318 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.72■■□□□ 1.07
TARDBP-228ENST00000629725 DUS2Q9NX74 493 aaKnown RBP21.72■■□□□ 1.07
TARDBP-228ENST00000629725 ODF2LQ9ULJ1 636 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 INVSQ9Y283 1065 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 C2CD2Q9Y426 696 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 NBEAQ8NFP9 2946 aa21.72■■□□□ 1.07
TARDBP-228ENST00000629725 DSPP15924 2871 aaKnown RBP21.71■■□□□ 1.07
TARDBP-228ENST00000629725 TMEM8BA6NDV4 472 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 CSRP1P21291 193 aaKnown RBP21.71■■□□□ 1.07
TARDBP-228ENST00000629725 FAM160A1Q05DH4 1040 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 STKLD1Q8NE28 680 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 TTC16Q8NEE8 873 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 TSTD1Q8NFU3 115 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 CCDC26Q8TAB7 109 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 ATP2A3Q93084 1043 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 TMEM121BQ9BXQ6 578 aaPredicted RBP21.71■■□□□ 1.07
TARDBP-228ENST00000629725 CCSER1Q9C0I3 900 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 DPP3Q9NY33 737 aa21.71■■□□□ 1.07
TARDBP-228ENST00000629725 CDX4O14627 284 aaPredicted RBP21.7■■□□□ 1.06
TARDBP-228ENST00000629725 PRPF40AO75400 957 aaKnown RBP21.7■■□□□ 1.06
TARDBP-228ENST00000629725 TOP3BO95985 862 aaKnown RBP21.7■■□□□ 1.06
TARDBP-228ENST00000629725 GPR15P49685 360 aa21.7■■□□□ 1.06
TARDBP-228ENST00000629725 ACOT2P49753 483 aa21.7■■□□□ 1.06
TARDBP-228ENST00000629725 SLC39A4Q6P5W5 647 aa21.7■■□□□ 1.06
TARDBP-228ENST00000629725 MYCT1Q8N699 235 aa21.7■■□□□ 1.06
TARDBP-228ENST00000629725 REEP2Q9BRK0 252 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms