RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 CUL4AQ13619 759 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 HEATR6Q6AI08 1181 aaKnown RBP12.01□□□□□ -0.49
CCDC163-208ENST00000629670 USP49Q70CQ1 688 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 LRRTM3Q86VH5 581 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 BRSK2Q8IWQ3 736 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 CCDC65Q8IXS2 484 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 LRRC52Q8N7C0 313 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 MAB21L3Q8N8X9 362 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 ANKRD36BP1Q96IX9 119 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 LRRC3BQ96PB8 259 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 PI4K2AQ9BTU6 479 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 IL21Q9HBE4 155 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 ABCB6Q9NP58 842 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 TDP1Q9NUW8 608 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 PANK4Q9NVE7 773 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
CCDC163-208ENST00000629670 CEP250Q9BV73 2442 aa12.01□□□□□ -0.49
CCDC163-208ENST00000629670 TICRRQ7Z2Z1 1910 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 HOXA6P31267 233 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 ATXN1P54253 815 aaKnown RBP12□□□□□ -0.49
CCDC163-208ENST00000629670 TNK2Q07912 1038 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 RUNX3Q13761 415 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 GAS6Q14393 721 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 PDGFRLQ15198 375 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 SURF1Q15526 300 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 TXNDC11Q6PKC3 985 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 Q6ZS52 159 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 MON1AQ86VX9 555 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 SPATA2LQ8IUW3 424 aaPredicted RBP12□□□□□ -0.49
CCDC163-208ENST00000629670 PDCL2Q8N4E4 241 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 FSIP1Q8NA03 581 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 LEO1Q8WVC0 666 aaPredicted RBP12□□□□□ -0.49
CCDC163-208ENST00000629670 DNAJC19Q96DA6 116 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 SAAL1Q96ER3 474 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 CLIC6Q96NY7 704 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 STRA6Q9BX79 667 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 PANK2Q9BZ23 570 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 SMG9Q9H0W8 520 aaKnown RBP12□□□□□ -0.49
CCDC163-208ENST00000629670 SLC8A2Q9UPR5 921 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 FRYLO94915 3013 aa12□□□□□ -0.49
CCDC163-208ENST00000629670 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 HRO43593 1189 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 TNNC2P02585 160 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 F11P03951 625 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 HMGA1P17096 107 aaKnown RBP11.99□□□□□ -0.49
CCDC163-208ENST00000629670 SYT1P21579 422 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 AMPD3Q01432 767 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 KCNA1Q09470 495 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 CCINQ13939 588 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 ZNF268Q14587 947 aaPredicted RBP11.99□□□□□ -0.49
CCDC163-208ENST00000629670 CSRP2Q16527 193 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
CCDC163-208ENST00000629670 TXNDC8Q6A555 127 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 DPH6Q7L8W6 267 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 WDR5BQ86VZ2 330 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 GPD1LQ8N335 351 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 CPA6Q8N4T0 437 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 TOP6BLQ8N6T0 577 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 C1orf127Q8N9H9 656 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 NETO1Q8TDF5 533 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 FAM83CQ9BQN1 747 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 IKZF4Q9H2S9 585 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
CCDC163-208ENST00000629670 PCIF1Q9H4Z3 704 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 TRPC7Q9HCX4 862 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 GDAP2Q9NXN4 497 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 L1RE1Q9UN81 338 aa11.99□□□□□ -0.49
CCDC163-208ENST00000629670 TRAV19A0A0A6YYK7 116 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 ZNF233A6NK53 670 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 K7ESF4 209 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 PRPF6O94906 941 aaKnown RBP11.98□□□□□ -0.49
CCDC163-208ENST00000629670 CKMP06732 381 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 USP17L7P0C7H9 530 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 DRD1P21728 446 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 TGM1P22735 817 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 PDE6CP51160 858 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 RESTQ13127 1097 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 NR1H3Q13133 447 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 SLC39A14Q15043 492 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 STK38Q15208 465 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 MAPRE1Q15691 268 aaKnown RBP11.98□□□□□ -0.49
CCDC163-208ENST00000629670 DDR2Q16832 855 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 DUOXA2Q1HG44 320 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 FBXO43Q4G163 708 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 ADGRF2Q8IZF7 708 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 CCDC26Q8TAB7 109 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
CCDC163-208ENST00000629670 TRMT2BQ96GJ1 504 aaKnown RBP11.98□□□□□ -0.49
CCDC163-208ENST00000629670 INTS4Q96HW7 963 aaKnown RBP11.98□□□□□ -0.49
CCDC163-208ENST00000629670 FUBP3Q96I24 572 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC163-208ENST00000629670 CBWD1Q9BRT8 395 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 EBF3Q9H4W6 596 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 KIAA1586Q9HCI6 787 aa11.98□□□□□ -0.49
CCDC163-208ENST00000629670 PDE11AQ9HCR9 933 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms