RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 VPS36Q86VN1 386 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 DCP1BQ8IZD4 617 aaKnown RBP13□□□□□ -0.33
CCDC163-205ENST00000628397 SPPL3Q8TCT6 385 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 EPS8L1Q8TE68 723 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 TCF25Q9BQ70 676 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 PDCL3Q9H2J4 239 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 DEF6Q9H4E7 631 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 ACP6Q9NPH0 428 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 TLR9Q9NR96 1032 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 FAM49BQ9NUQ9 324 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 SEPT11Q9NVA2 429 aaKnown RBP13□□□□□ -0.33
CCDC163-205ENST00000628397 MTRRQ9UBK8 725 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 KIAA1257Q9ULG3 409 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
CCDC163-205ENST00000628397 BZW2Q9Y6E2 419 aaKnown RBP13□□□□□ -0.33
CCDC163-205ENST00000628397 PTPRDP23468 1912 aa13□□□□□ -0.33
CCDC163-205ENST00000628397 ATP8B3O60423 1300 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 H3BNC9 293 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 OR4Q2P0C623 313 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 ARPP19P56211 112 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 SMC1AQ14683 1233 aaKnown RBP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 STILQ15468 1287 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 LRIT3Q3SXY7 679 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 KIAA0319Q5VV43 1072 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 PLPP4Q5VZY2 271 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 WDR59Q6PJI9 974 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 ZNF677Q86XU0 584 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 GLYCTKQ8IVS8 523 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 CRYBG2Q8N1P7 616 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 C12orf29Q8N999 325 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 CCDC112Q8NEF3 446 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 LNX1Q8TBB1 728 aaPredicted RBP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 SLC20A1Q8WUM9 679 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 AUTS2Q8WXX7 1259 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 BAG1Q99933 345 aaPredicted RBP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 MED10Q9BTT4 135 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 ZCWPW1Q9H0M4 648 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 HAUS4Q9H6D7 363 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 CRTAC1Q9NQ79 661 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 NOCTQ9UK39 431 aaKnown RBP12.99□□□□□ -0.33
CCDC163-205ENST00000628397 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 CDY1Q9Y6F8 540 aa12.99□□□□□ -0.33
CCDC163-205ENST00000628397 MYBPHLA2RUH7 354 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 M0QYV0 167 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 GRM6O15303 877 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CCDC130P13994 396 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 RPL17P18621 184 aaKnown RBP12.98□□□□□ -0.33
CCDC163-205ENST00000628397 ADORA2BP29275 332 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CDK17Q00537 523 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CDR2Q01850 454 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CYP27A1Q02318 531 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 GOLGA7BQ2TAP0 167 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 HGSNATQ68CP4 663 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 C4orf50Q6ZRC1 276 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 SPATA2LQ8IUW3 424 aaPredicted RBP12.98□□□□□ -0.33
CCDC163-205ENST00000628397 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 GPR65Q8IYL9 337 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 MYCBPAPQ8TBZ2 947 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 MICAL1Q8TDZ2 1067 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 ZNF606Q8WXB4 792 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 TFAP2BQ92481 460 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CYFIP2Q96F07 1278 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 PCED1BQ96HM7 432 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 LPIN3Q9BQK8 851 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC163-205ENST00000628397 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 HESX1Q9UBX0 185 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 GTF3C4Q9UKN8 822 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC163-205ENST00000628397 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
CCDC163-205ENST00000628397 PLXNA3P51805 1871 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 PATJQ8NI35 1801 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 SSU72P8A0A1W2PR75 194 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 O00370 1275 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 TBC1D4O60343 1298 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 CXCL14O95715 111 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 MMEP08473 750 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 TNFAIP3P21580 790 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 FECHP22830 423 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 DNAJB1P25685 340 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
CCDC163-205ENST00000628397 OR1D2P34982 312 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 EIF4A3P38919 411 aaKnown RBP12.97□□□□□ -0.33
CCDC163-205ENST00000628397 NDUFV1P49821 464 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 ERVFC1P60507 584 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 ROR1Q01973 937 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 CNGA2Q16280 664 aa12.97□□□□□ -0.33
CCDC163-205ENST00000628397 NFE2Q16621 373 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms