RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 PDE5AO76074 875 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 NPR1P16066 1061 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 GSTT1P30711 240 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 BAG6P46379 1132 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 SLC12A1Q13621 1099 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 SPOCD1Q6ZMY3 1216 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 MCOLN2Q8IZK6 566 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 PARD3BQ8TEW8 1205 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 ARMCX1Q9P291 453 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 SLC12A6Q9UHW9 1150 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 CACNA1FO60840 1977 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 FASTKD1Q53R41 847 aaKnown RBP18.47■□□□□ 0.55
FARP1-242ENST00000627049 CDC42EP5Q6NZY7 148 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 PID1Q7Z2X4 250 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 TLCD1Q96CP7 247 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 MMADHCQ9H3L0 296 aaPredicted RBP18.47■□□□□ 0.55
FARP1-242ENST00000627049 MAP4P27816 1152 aaKnown RBP18.47■□□□□ 0.55
FARP1-242ENST00000627049 NUDT2P50583 147 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 CUL2Q13617 745 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 WDR72Q3MJ13 1102 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.47■□□□□ 0.558e-7■■■■□ 22
FARP1-242ENST00000627049 LRRC19Q9H756 370 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 ABLIM1O14639 778 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 ZC3H11AO75152 810 aaKnown RBP eCLIP18.47■□□□□ 0.556e-13■□□□□ 9.2
FARP1-242ENST00000627049 CHEK2O96017 543 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 PAMP19021 973 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 MARCKSL1P49006 195 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 NLRP11P59045 1033 aaKnown RBP18.47■□□□□ 0.55
FARP1-242ENST00000627049 ALG3Q92685 438 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 PGBD4Q96DM1 585 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 KIFC3Q9BVG8 833 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 ZNF302Q9NR11 478 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 SOX13Q9UN79 622 aa18.47■□□□□ 0.55
FARP1-242ENST00000627049 A8MUI8 341 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 AKAP10O43572 662 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 TMCC1O94876 653 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 SSTR1P30872 391 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
FARP1-242ENST00000627049 ZNF268Q14587 947 aaPredicted RBP18.46■□□□□ 0.55
FARP1-242ENST00000627049 PDK4Q16654 411 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 SGSM1Q2NKQ1 1148 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 WLSQ5T9L3 541 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 IYDQ6PHW0 289 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 ATP6V1E2Q96A05 226 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 SPC25Q9HBM1 224 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 C5orf60A6NFR6 353 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 EXTL3O43909 919 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 SMIM5Q71RC9 77 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 GIPC2Q8TF65 315 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 PSPC1Q8WXF1 523 aaKnown RBP18.46■□□□□ 0.55
FARP1-242ENST00000627049 EXT2Q93063 718 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 PKD2L2Q9NZM6 624 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 LZTS1Q9Y250 596 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 KCNQ2O43526 872 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 NOL4O94818 638 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 FAM200BP0CF97 657 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 MARSP56192 900 aaKnown RBP18.46■□□□□ 0.55
FARP1-242ENST00000627049 BLMHQ13867 455 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 NOP9Q86U38 636 aaKnown RBP18.46■□□□□ 0.55
FARP1-242ENST00000627049 ETNPPLQ8TBG4 499 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 MPP4Q96JB8 637 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 STX18Q9P2W9 335 aaKnown RBP18.46■□□□□ 0.55
FARP1-242ENST00000627049 MST1RQ04912 1400 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 CIITAP33076 1130 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 KCNA1Q09470 495 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 ARL13BQ3SXY8 428 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 TXNRD3Q86VQ6 643 aa18.46■□□□□ 0.55
FARP1-242ENST00000627049 DGKIO75912 1065 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 HDAC4P56524 1084 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 ZNF398Q8TD17 642 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
FARP1-242ENST00000627049 KCTD10Q9H3F6 313 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 SLCO1B3Q9NPD5 702 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 KCNH7Q9NS40 1196 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 HERC5Q9UII4 1024 aaKnown RBP18.45■□□□□ 0.54
FARP1-242ENST00000627049 DNAJC16Q9Y2G8 782 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 SYCE1LA8MT33 242 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 TMED10P49755 219 aaKnown RBP18.45■□□□□ 0.54
FARP1-242ENST00000627049 RIMS1Q86UR5 1692 aaKnown RBP18.45■□□□□ 0.54
FARP1-242ENST00000627049 KDM1AO60341 852 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 KRT36O76013 467 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 CYP4A22Q5TCH4 519 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 TTC8Q8TAM2 541 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 TMC2Q8TDI7 906 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 MAML3Q96JK9 1138 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 RNF146Q9NTX7 359 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 IVNS1ABPQ9Y6Y0 642 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 MYO5BQ9ULV0 1848 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 ALADP13716 330 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 SPRP35270 261 aaPredicted RBP18.45■□□□□ 0.54
FARP1-242ENST00000627049 CHKAP35790 457 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 PPM1FP49593 454 aaPredicted RBP18.45■□□□□ 0.54
FARP1-242ENST00000627049 ITPK1Q13572 414 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 INPP5AQ14642 412 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 EEPD1Q7L9B9 569 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 ACTL9Q8TC94 416 aa18.45■□□□□ 0.54
FARP1-242ENST00000627049 CCDC90BQ9GZT6 254 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms