RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 CDC25CP30307 473 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 MAGEA11P43364 429 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 CASP4P49662 377 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 MYL6P60660 151 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 NCOA4Q13772 614 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 OSTM1Q86WC4 334 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 SIX5Q8N196 739 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 SHKBP1Q8TBC3 707 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 FAM200AQ8TCP9 573 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 SMARCE1Q969G3 411 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 SHDQ96IW2 340 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 MKNK1Q9BUB5 465 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 RPP25Q9BUL9 199 aaKnown RBP23.92■■□□□ 1.42
SF1-220ENST00000626028 TMLHEQ9NVH6 421 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 GTF3C4Q9UKN8 822 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 MAPK8IP1Q9UQF2 711 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 ANAPC1Q9H1A4 1944 aa23.92■■□□□ 1.42
SF1-220ENST00000626028 MYH10P35580 1976 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 KINO60870 393 aaKnown RBP23.91■■□□□ 1.42
SF1-220ENST00000626028 CFHP08603 1231 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 PSMC2P35998 433 aaKnown RBP23.91■■□□□ 1.42
SF1-220ENST00000626028 PPP1R2P41236 205 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 VAMP7P51809 220 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 ADAM9Q13443 819 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 BIRC3Q13489 604 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 TAF12Q16514 161 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 SGSM1Q2NKQ1 1148 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 ARHGAP15Q53QZ3 475 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 FAM78AQ5JUQ0 283 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 PHLDB3Q6NSJ2 640 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 SPATA2LQ8IUW3 424 aaPredicted RBP23.91■■□□□ 1.42
SF1-220ENST00000626028 GPR152Q8TDT2 470 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 SYT15Q9BQS2 421 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 SNX25Q9H3E2 840 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 CHMP5Q9NZZ3 219 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 RAPGEFL1Q9UHV5 662 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 PCDHA5Q9Y5H7 936 aa23.91■■□□□ 1.42
SF1-220ENST00000626028 AKAP3O75969 853 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 PDGFBP01127 241 aaPredicted RBP23.9■■□□□ 1.42
SF1-220ENST00000626028 CSH1P0DML2 217 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 CSH2P0DML3 217 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 KRT13P13646 458 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 P4HA1P13674 534 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 FCARP24071 287 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 ACAT1P24752 427 aaKnown RBP23.9■■□□□ 1.42
SF1-220ENST00000626028 GNL1P36915 607 aaPredicted RBP23.9■■□□□ 1.42
SF1-220ENST00000626028 GPC5P78333 572 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 ZNF699Q32M78 642 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 VSTM1Q6UX27 236 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 GAREM2Q75VX8 874 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 DEPDC1BQ8WUY9 529 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 GCNAQ96QF7 691 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 KXD1Q9BQD3 176 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 IRF2BPLQ9H1B7 796 aa23.9■■□□□ 1.42
SF1-220ENST00000626028 A0A1W2PRU2 124 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 SOAT2O75908 522 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 AOC1P19801 751 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 GABRR2P28476 465 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 GTF2H1P32780 548 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 PRCPP42785 496 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 PRKCQQ04759 706 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 TEAD2Q15562 447 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 ZNF667Q5HYK9 610 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 TANGO2Q6ICL3 276 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 FAM186BQ8IYM0 893 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 ZSCAN18Q8TBC5 510 aaPredicted RBP23.89■■□□□ 1.41
SF1-220ENST00000626028 TRMT2BQ96GJ1 504 aaKnown RBP23.89■■□□□ 1.41
SF1-220ENST00000626028 LPIN3Q9BQK8 851 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 PI4K2AQ9BTU6 479 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 TRPV5Q9NQA5 729 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 ARHGEF3Q9NR81 526 aa23.89■■□□□ 1.41
SF1-220ENST00000626028 UXTQ9UBK9 157 aaPredicted RBP23.89■■□□□ 1.41
SF1-220ENST00000626028 MYBPHLA2RUH7 354 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 NPR3P17342 541 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 LMO2P25791 158 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 DDX6P26196 483 aaKnown RBP eCLIP23.88■■□□□ 1.41
SF1-220ENST00000626028 ANP32AP39687 249 aaKnown RBP23.88■■□□□ 1.41
SF1-220ENST00000626028 PLA2G5P39877 138 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 DLG4P78352 724 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 LRRC63Q05C16 580 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 STIM1Q13586 685 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 POTEHQ6S545 545 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 SV2AQ7L0J3 742 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 MYCBPAPQ8TBZ2 947 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 DNASE1L2Q92874 299 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 MYRFLQ96LU7 910 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 ZSWIM3Q96MP5 696 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 TSG101Q99816 390 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 ATXN3LQ9H3M9 355 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 SLITRK6Q9H5Y7 841 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 ZNF334Q9HCZ1 680 aaPredicted RBP23.88■■□□□ 1.41
SF1-220ENST00000626028 OBP2AQ9NY56 170 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 MAGEC2Q9UBF1 373 aaPredicted RBP23.88■■□□□ 1.41
SF1-220ENST00000626028 TICRRQ7Z2Z1 1910 aa23.88■■□□□ 1.41
SF1-220ENST00000626028 KRBA1A5PL33 1030 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 CETN3O15182 167 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 VNN1O95497 513 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 HMGA1P17096 107 aaKnown RBP23.87■■□□□ 1.41
SF1-220ENST00000626028 PSMC3P17980 439 aa23.87■■□□□ 1.41
SF1-220ENST00000626028 CYP2F1P24903 491 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms