RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ELOVL4Q9GZR5 314 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 MTRRQ9UBK8 725 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 SSX2IPQ9Y2D8 614 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 OR6C75A6NL08 312 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 NCK2O43639 380 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 LILRB3O75022 631 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 KRT9P35527 623 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 ARID5BQ14865 1188 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 DUSP6Q16828 381 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 CTXN3Q4LDR2 81 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 CRYBG2Q8N1P7 616 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 OR10T2Q8NGX3 314 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 PABPC5Q96DU9 382 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 TNIP3Q96KP6 325 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 DNAI2Q9GZS0 605 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 CLDND1Q9NY35 253 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 CDH9Q9ULB4 789 aa21.13■□□□□ 0.97
PDLIM2-221ENST00000622702 LRRC53A6NM62 1247 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 LINC01565O15544 149 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 HCRTO43612 131 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 MFAP3LO75121 409 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 PAEPP09466 180 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 PDGFRBP09619 1106 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 PNMA6AP0CW24 399 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 PSMD5Q16401 504 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 ZNF394Q53GI3 561 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 PRSS55Q6UWB4 352 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 CNGA4Q8IV77 575 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 EFHBQ8N7U6 833 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 SLC4A11Q8NBS3 891 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 SYN2Q92777 582 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 TMEM176AQ96HP8 235 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 CDCA3Q99618 268 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 UBE2ZQ9H832 354 aaPredicted RBP21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 RXFP1Q9HBX9 757 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 AIPL1Q9NZN9 384 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 COG5Q9UP83 839 aa21.12■□□□□ 0.97
PDLIM2-221ENST00000622702 AKR1B15C9JRZ8 316 aaPredicted RBP21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 CYP26A1O43174 497 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 ACAT1P24752 427 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 CLCN1P35523 988 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 USP8P40818 1118 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 CREMQ03060 361 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 ADAM15Q13444 863 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 COL19A1Q14993 1142 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 CTC1Q2NKJ3 1217 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 INTS6LQ5JSJ4 861 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 SLC8B1Q6J4K2 584 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 SPC24Q8NBT2 197 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 DNAJC7Q99615 494 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 SYT15Q9BQS2 421 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 EMILIN2Q9BXX0 1053 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 DPEP3Q9H4B8 488 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 FNIP2Q9P278 1114 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 THEGQ9P2T0 379 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 KIAA1257Q9ULG3 409 aa21.11■□□□□ 0.97
PDLIM2-221ENST00000622702 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 CLASP2O75122 1294 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 GFPT2O94808 682 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 CNPP09543 421 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 FERP16591 822 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 HNRNPH3P31942 346 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 BPIFB4P59827 614 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 RBM10P98175 930 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 TSPY1Q01534 308 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 SFMBT2Q5VUG0 894 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 ACOT1Q86TX2 421 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 B3GALNT2Q8NCR0 500 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 OR8K1Q8NGG5 319 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 PDLIM2Q96JY6 352 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 KLHL5Q96PQ7 755 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 PKMYT1Q99640 499 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 ZCWPW1Q9H0M4 648 aa21.1■□□□□ 0.97
PDLIM2-221ENST00000622702 BRWD1Q9NSI6 2320 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 CCDC172P0C7W6 258 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 PTPN1P18031 435 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 KCNA5P22460 613 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 TFF2Q03403 129 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 PTK2Q05397 1052 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 ORC1Q13415 861 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 E4F1Q66K89 784 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 LLGL2Q6P1M3 1020 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 FAM171BQ6P995 826 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 RSPO2Q6UXX9 243 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 IRF2BP2Q7Z5L9 587 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 TC2NQ8N9U0 490 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 CRTAC1Q9NQ79 661 aa21.09■□□□□ 0.97
PDLIM2-221ENST00000622702 GOLGA6L6A8MZA4 724 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 ATP2C2O75185 946 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 GLP2RO95838 553 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 KLRC2P26717 231 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 LTBRP36941 435 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 NDUFV1P49821 464 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 ADKP55263 362 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 PSMC1P62191 440 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 DLX2Q07687 328 aaPredicted RBP21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 VN1R2Q8NFZ6 395 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 MYCBPAPQ8TBZ2 947 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms