RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 LACTBL1A8MY62 500 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 HBP1O60381 514 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 GH1P01241 217 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 IL1R2P27930 398 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 RAD23BP54727 409 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 MOGSQ13724 837 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 FASTKD3Q14CZ7 662 aaKnown RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 EAPPQ56P03 285 aaPredicted RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 ZNF667Q5HYK9 610 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 PIGWQ7Z7B1 504 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 CCDC134Q9H6E4 229 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 SMYD3Q9H7B4 428 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 TNFSF13BQ9Y275 285 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 DNALI1O14645 258 aaPredicted RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 LRCH4O75427 683 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 C22orf31O95567 290 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 ITGB3P05106 788 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 INSRRP14616 1297 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 BRAFP15056 766 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 PECAM1P16284 738 aaPredicted RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 OASLQ15646 514 aaKnown RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 ANKRD20A8PQ5CZ79 823 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 JADE1Q6IE81 842 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 DRICH1Q6PGQ1 229 aaPredicted RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 SRRM1Q8IYB3 904 aaKnown RBP12.62□□□□□ -0.39
TP53-227ENST00000622645 CCT6BQ92526 530 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 CPB2Q96IY4 423 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 MCM3APO60318 1980 aa12.62□□□□□ -0.39
TP53-227ENST00000622645 OTOFQ9HC10 1997 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 A0A087WZ62 844 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 C3orf70A6NLC5 250 aaPredicted RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 SIGLEC16A6NMB1 481 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 ASAP2O43150 1006 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 SLC26A2P50443 739 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 VCPP55072 806 aaKnown RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 YWHAEP62258 255 aaKnown RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 TAP1Q03518 808 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 CAPN12Q6ZSI9 719 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 NIPA2Q8N8Q9 360 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 FDXACB1Q9BRP7 624 aaPredicted RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 SGK1O00141 431 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 CDH16O75309 829 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 TCEA3O75764 348 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 CD48P09326 243 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 ATP5DP30049 168 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 HNRNPH1P31943 449 aaKnown RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 COPS2P61201 443 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 SLC25A11Q02978 314 aaKnown RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 TTLL4Q14679 1199 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 CNPY4Q8N129 248 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 SLC4A11Q8NBS3 891 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 GDAP1Q8TB36 358 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 BCO2Q9BYV7 579 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 LHX5Q9H2C1 402 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 SYNCQ9H7C4 482 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 DDX56Q9NY93 547 aaKnown RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 ERAP1Q9NZ08 941 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 PCSK1NQ9UHG2 260 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 TPX2Q9ULW0 747 aaKnown RBP12.61□□□□□ -0.39
TP53-227ENST00000622645 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 LRRC37A2A6NM11 1700 aa12.61□□□□□ -0.39
TP53-227ENST00000622645 TCP11X1B4DZS4 312 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 GOLGA8MH3BSY2 632 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 ERBB2P04626 1255 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 CYP2C8P10632 490 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 POLR2BP30876 1174 aaKnown RBP12.6□□□□□ -0.39
TP53-227ENST00000622645 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 CCHCR1Q8TD31 782 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 CDCA5Q96FF9 252 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 ELOVL4Q9GZR5 314 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 METTL5Q9NRN9 209 aaKnown RBP12.6□□□□□ -0.39
TP53-227ENST00000622645 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 DRG1Q9Y295 367 aaKnown RBP12.6□□□□□ -0.39
TP53-227ENST00000622645 MED7O43513 233 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 CST8O60676 142 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 IL18RAPO95256 599 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 VTNP04004 478 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 GDF10P55107 478 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 STAT4Q14765 748 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 TAF5Q15542 800 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 XYLT1Q86Y38 959 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 TAB3Q8N5C8 712 aaPredicted RBP12.6□□□□□ -0.39
TP53-227ENST00000622645 CXorf38Q8TB03 319 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 SLC35B2Q8TB61 432 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 ACTL9Q8TC94 416 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 NKD2Q969F2 451 aaPredicted RBP12.6□□□□□ -0.39
TP53-227ENST00000622645 CCDC77Q9BR77 488 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 FGFR1OP2Q9NVK5 253 aa12.6□□□□□ -0.39
TP53-227ENST00000622645 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms