RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 LHX1P48742 406 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 BCAR1P56945 870 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 GNG11P61952 73 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 STILQ15468 1287 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 CNGA2Q16280 664 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 CCDC142Q17RM4 750 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 PPP1R26Q5T8A7 1209 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 KIAA0319Q5VV43 1072 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 FAM117BQ6P1L5 589 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 METTL23Q86XA0 190 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 PHF13Q86YI8 300 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 CRYBG2Q8N1P7 616 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 SLC35F6Q8N357 371 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 RFFLQ8WZ73 363 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 SECISBP2LQ93073 1101 aaKnown RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF653Q96CK0 615 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF689Q96CS4 500 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 TNIP3Q96KP6 325 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 RTP3Q9BQQ7 232 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 C11orf70Q9BRQ4 267 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 COLEC11Q9BWP8 271 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 LHX5Q9H2C1 402 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 CWH43Q9H720 699 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ADAM28Q9UKQ2 775 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
CPNE3-212ENST00000621783 CAPN6Q9Y6Q1 641 aa11.31□□□□□ -0.6
CPNE3-212ENST00000621783 A0A0A6YYK5 440 aaPredicted RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 FANCGO15287 622 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 BUB1O43683 1085 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 TADA2AO75478 443 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 FGBP02675 491 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 ALDH2P05091 517 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 PCSK1P29120 753 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 ADORA2BP29275 332 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 TKTP29401 623 aaKnown RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 PBX3P40426 434 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 ETF1P62495 437 aaKnown RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 PTP4A2Q12974 167 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 PKDCCQ504Y2 493 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 MDH1BQ5I0G3 518 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF569Q5MCW4 686 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 DNTTIP2Q5QJE6 756 aaKnown RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM240Q5SV17 173 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 FUT10Q6P4F1 479 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 SYT10Q6XYQ8 523 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM173Q86WV6 379 aaPredicted RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 WDTC1Q8N5D0 677 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 BCL7CQ8WUZ0 217 aaPredicted RBP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 TRIM11Q96F44 468 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 WDR24Q96S15 920 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 MYO1AQ9UBC5 1043 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 CYTH4Q9UIA0 394 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 CDH9Q9ULB4 789 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 FAN1Q9Y2M0 1017 aa11.3□□□□□ -0.6
CPNE3-212ENST00000621783 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.6
CPNE3-212ENST00000621783 NT5C1B-RDH14C9J2C7 533 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 SYN3O14994 580 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 TRAPPC3O43617 180 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 CYP1A2P05177 515 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 MYBL1P10243 752 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 PTPN1P18031 435 aaKnown RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 MMP8P22894 467 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 BCAT1P54687 386 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 GPC5P78333 572 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 PDCLQ13371 301 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 BTG3Q14201 252 aaPredicted RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 PTPN20Q4JDL3 420 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 C2CD6Q53TS8 623 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 INTS6LQ5JSJ4 861 aaKnown RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 RNF10Q8N5U6 811 aaKnown RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 OR10T2Q8NGX3 314 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 UBA3Q8TBC4 463 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 NOX5Q96PH1 765 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 YME1L1Q96TA2 773 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 AVENQ9NQS1 362 aaPredicted RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 HESX1Q9UBX0 185 aa11.29□□□□□ -0.6
CPNE3-212ENST00000621783 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
CPNE3-212ENST00000621783 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms