RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 LIMS2Q7Z4I7 341 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 TOP6BLQ8N6T0 577 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 TMEM35BQ8NCS4 154 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 RSPH1Q8WYR4 309 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 NAPGQ99747 312 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-216ENST00000621396 ELAC1Q9H777 363 aaKnown RBP16.87■□□□□ 0.29
CBWD3-216ENST00000621396 SZT2Q5T011 3432 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 RIOK3O14730 519 aaKnown RBP16.87■□□□□ 0.29
CBWD3-216ENST00000621396 NRP1O14786 923 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 ZNF185O15231 689 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 GPD2P43304 727 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 PTP4A2Q12974 167 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 B3GALNT2Q8NCR0 500 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 LRRN4CLQ8ND94 238 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 RHOBTB2Q9BYZ6 727 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 GTF3C4Q9UKN8 822 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 INTUQ9ULD6 942 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
CBWD3-216ENST00000621396 MYBPHLA2RUH7 354 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 GABRDO14764 452 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 KIAA0355O15063 1070 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 INPPL1O15357 1258 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 MED7O43513 233 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 PFKMP08237 780 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 MMP8P22894 467 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 CNGA2Q16280 664 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 DCLRE1AQ6PJP8 1040 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 C16orf59Q7L2K0 433 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 CEP57Q86XR8 500 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 NPAS4Q8IUM7 802 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 TXLNBQ8N3L3 684 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 RNF10Q8N5U6 811 aaKnown RBP16.86■□□□□ 0.29
CBWD3-216ENST00000621396 BADQ92934 168 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 DDX27Q96GQ7 796 aaKnown RBP16.86■□□□□ 0.29
CBWD3-216ENST00000621396 ALS2CR12Q96Q35 445 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 PCDHGC5Q9Y5F6 944 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
CBWD3-216ENST00000621396 MESDQ14696 234 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 MDH1BQ5I0G3 518 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 PMF1Q6P1K2 205 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 UNC93AQ86WB7 457 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 ERICH1Q86X53 443 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 C7orf61Q8IZ16 206 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 ZNF564Q8TBZ8 553 aaPredicted RBP16.86■□□□□ 0.29
CBWD3-216ENST00000621396 RTP3Q9BQQ7 232 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 CRTAC1Q9NQ79 661 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 KANSL3Q9P2N6 904 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 CEP83Q9Y592 693 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 CEP290O15078 2479 aa16.86■□□□□ 0.29
CBWD3-216ENST00000621396 GOLGA8SH3BPF8 625 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 BEST1O76090 585 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 PARNO95453 639 aaKnown RBP16.85■□□□□ 0.29
CBWD3-216ENST00000621396 WARSP23381 471 aaKnown RBP16.85■□□□□ 0.29
CBWD3-216ENST00000621396 SLC11A1P49279 550 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 RPL7AP62424 266 aaKnown RBP16.85■□□□□ 0.29
CBWD3-216ENST00000621396 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 LRRC57Q8N9N7 239 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 GPR62Q9BZJ7 368 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 NCANO14594 1321 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 TADA2AO75478 443 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 ERBB2P04626 1255 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 CYP1A2P05177 515 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 OR4Q2P0C623 313 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 PTPN1P18031 435 aaKnown RBP16.85■□□□□ 0.29
CBWD3-216ENST00000621396 EPHB4P54760 987 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 PDE4CQ08493 712 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 LCLAT1Q6UWP7 414 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 PHF13Q86YI8 300 aaPredicted RBP16.85■□□□□ 0.29
CBWD3-216ENST00000621396 CRYBG2Q8N1P7 616 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 PIWIL1Q96J94 861 aaKnown RBP16.85■□□□□ 0.29
CBWD3-216ENST00000621396 CAPZA3Q96KX2 299 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 TLR10Q9BXR5 811 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 SYNCQ9H7C4 482 aa16.85■□□□□ 0.29
CBWD3-216ENST00000621396 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 BTNL10A8MVZ5 291 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 ODC1P11926 461 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 PDCLQ13371 301 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 MAMLD1Q13495 774 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 OR10T2Q8NGX3 314 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 BCL7CQ8WUZ0 217 aaPredicted RBP16.84■□□□□ 0.29
CBWD3-216ENST00000621396 B3GNT5Q9BYG0 378 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 SMARCAL1Q9NZC9 954 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 ANAPC7Q9UJX3 599 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 MICAL3Q7RTP6 2002 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 CHD9Q3L8U1 2897 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 A0A0A6YYK5 440 aaPredicted RBP16.84■□□□□ 0.29
CBWD3-216ENST00000621396 DGKIO75912 1065 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 ALDH2P05091 517 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
CBWD3-216ENST00000621396 PAQR9Q6ZVX9 377 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 FUKQ8N0W3 1084 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 TOP1MTQ969P6 601 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 PCED1BQ96HM7 432 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 UROC1Q96N76 676 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 LHX5Q9H2C1 402 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 TMEM30AQ9NV96 361 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 EHD2Q9NZN4 543 aa16.84■□□□□ 0.29
CBWD3-216ENST00000621396 JRKLQ9Y4A0 524 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms