RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 MPP2Q14168 576 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 RCN1Q15293 331 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 TSNAXIP1Q2TAA8 658 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 PCNX4Q63HM2 1172 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 ANKS1BQ7Z6G8 1248 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 MCOLN2Q8IZK6 566 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 SEC14L1Q92503 715 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 KLF6Q99612 283 aaPredicted RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 NDEL1Q9GZM8 345 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 SAYSD1Q9NPB0 183 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 PARP2Q9UGN5 583 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 PCYOX1Q9UHG3 505 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 SH3GLB1Q9Y371 365 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 PTPRJQ12913 1337 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 KRT19P08727 400 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 GZMAP12544 262 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 CD19P15391 556 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 MMP13P45452 471 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 PTDSS1P48651 473 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 NOP14P78316 857 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 CLEC16AQ2KHT3 1053 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 IZUMO3Q5VZ72 239 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 B3GNT9Q6UX72 402 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 OR5B17Q8NGF7 314 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 DEPTORQ8TB45 409 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 ATXN2LQ8WWM7 1075 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 MPP4Q96JB8 637 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 MSTO1Q9BUK6 570 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 C12orf65Q9H3J6 166 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 RASA4BC9J798 803 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 RASA4O43374 803 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 MAP3K6O95382 1288 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 CETPP11597 493 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 ATP6V1C1P21283 382 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 NRLP54845 237 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 HDAC4P56524 1084 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 RIPK1Q13546 671 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 FASTKD3Q14CZ7 662 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 CNGA2Q16280 664 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH1-214ENST00000621016 LRRN4Q8WUT4 740 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 TXLNGYQ9BZA5 131 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
CDH1-214ENST00000621016 RBAKQ9NYW8 714 aaPredicted RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 AGO2Q9UKV8 859 aaKnown RBP11.25□□□□□ -0.61
CDH1-214ENST00000621016 UBE4BO95155 1302 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 F8VP50 259 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 CSPG5O95196 566 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 CYP1A1P04798 512 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 NUDT17P0C025 328 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 GBP1P32455 592 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SIX1Q15475 284 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 SMAD1Q15797 465 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 TDRD10Q5VZ19 366 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 TXNRD3NBQ6F5E7 133 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 C4orf19Q8IY42 314 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 RIBC1Q8N443 379 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 ART4Q93070 314 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SNF8Q96H20 258 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 ZNF317Q96PQ6 595 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 TGS1Q96RS0 853 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 WRNIP1Q96S55 665 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDH1-214ENST00000621016 OSBPL8Q9BZF1 889 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SLC7A5P2Q9GIP4 190 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 PCDH18Q9HCL0 1135 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDH1-214ENST00000621016 WDR37Q9Y2I8 494 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 A0A0J9YVX5 310 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 AGTP01019 485 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 CYP1A2P05177 515 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 HIRAP54198 1017 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 TFAMQ00059 246 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 CNTN2Q02246 1040 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 GPS1Q13098 491 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 THOC7Q6I9Y2 204 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SLC2A7Q6PXP3 512 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 USP37Q86T82 979 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 THNSL1Q8IYQ7 743 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 EIF1ADQ8N9N8 165 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 SLC43A3Q8NBI5 491 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 DDX1Q92499 740 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 CD101Q93033 1021 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 HSPBAP1Q96EW2 488 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 PGM2Q96G03 612 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 MCEEQ96PE7 176 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms