RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 E9PBE3 544 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 DEFB107AQ8IZN7 70 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ATG16L2Q8NAA4 619 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 MARCH7Q9H992 704 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 RIC8BQ9NVN3 520 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 STX11O75558 287 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 CD58P19256 250 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 EIF2S3LQ2VIR3 472 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 TCHHL1Q5QJ38 904 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 SAMD3Q8N6K7 520 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 CCDC115Q96NT0 180 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 PCIF1Q9H4Z3 704 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ATXN2Q99700 1313 aaKnown RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 MLNP12872 115 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 EXOC3L1Q86VI1 746 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 TNKSO95271 1327 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 UBA6A0AVT1 1052 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-208ENST00000618395 PLOD3O60568 738 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 PRCPP42785 496 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 CAPZA2P47755 286 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 SLC5A9Q2M3M2 681 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ARMCX2Q7L311 632 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 CHMP1BQ7LBR1 199 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 JAG2Q9Y219 1238 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 PCDHGA10Q9Y5H3 936 aa15.6■□□□□ 0.09
COL5A1-208ENST00000618395 ULK3Q6PHR2 472 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 C11orf74Q86VG3 221 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 OSBPL11Q9BXB4 747 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 ZBED4O75132 1171 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 TOP3BO95985 862 aaKnown RBP15.59■□□□□ 0.09
COL5A1-208ENST00000618395 RAB2AP61019 212 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 KYQ8NBH2 561 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 IRX2Q9BZI1 471 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-208ENST00000618395 SHCBP1LQ9BZQ2 653 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 COMMD8Q9NX08 183 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 NXF1Q9UBU9 619 aaKnown RBP15.59■□□□□ 0.09
COL5A1-208ENST00000618395 NDUFB9Q9Y6M9 179 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 ARHGEF11O15085 1522 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 ZNF197O14709 1029 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 S100A12P80511 92 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 DDI2Q5TDH0 399 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 ITIH6Q6UXX5 1313 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 PCDH11YQ9BZA8 1340 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 TM9SF1O15321 606 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 MAGEA4P43358 317 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 SPOUT1Q5T280 376 aaKnown RBP15.59■□□□□ 0.09
COL5A1-208ENST00000618395 MOSPD2Q8NHP6 518 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 GSTK1Q9Y2Q3 226 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 KCNN4O15554 427 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 BCAR1P56945 870 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 DDR1Q08345 913 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 C6orf183Q5T699 404 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 CCDC185Q8N715 623 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 MAP4K1Q92918 833 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 L2HGDHQ9H9P8 463 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 SMCO3A2RU48 225 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 RAG1P15918 1043 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 PSMD4P55036 377 aaKnown RBP15.59■□□□□ 0.09
COL5A1-208ENST00000618395 SPAG16Q8N0X2 631 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 AP3S1Q92572 193 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 PNKPQ96T60 521 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 TMCC3Q9ULS5 477 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 MAPKBP1O60336 1514 aa15.59■□□□□ 0.09
COL5A1-208ENST00000618395 POLR2MP0CAP2 368 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 FAM47AQ5JRC9 791 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 MZT2AQ6P582 158 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 KRT78Q8N1N4 520 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 GSDMCQ9BYG8 508 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 GIN1Q9NXP7 522 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 UTYO14607 1347 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 PLA2G4BP0C869 781 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 MYBL2P10244 700 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 TCF4P15884 667 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 POU5F1Q01860 360 aaKnown RBP15.58■□□□□ 0.09
COL5A1-208ENST00000618395 PEG10Q86TG7 708 aaKnown RBP15.58■□□□□ 0.09
COL5A1-208ENST00000618395 FAM9CQ8IZT9 166 aa15.58■□□□□ 0.09
COL5A1-208ENST00000618395 A0A0X1KG70 313 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 HAT1O14929 419 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 CYP2D6P10635 497 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 GALK1P51570 392 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 CCNIQ14094 377 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 EPHX4Q8IUS5 362 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 TMEM35BQ8NCS4 154 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SGF29Q96ES7 293 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 TMEM138Q9NPI0 162 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 RTCBQ9Y3I0 505 aaKnown RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SNAP23O00161 211 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 KPNA5O15131 536 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 MTSS1O43312 755 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SLC26A4O43511 780 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 FARP2O94887 1054 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 IFNA16P05015 189 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 ITGA6P23229 1130 aa15.58■□□□□ 0.08
COL5A1-208ENST00000618395 BST2Q10589 180 aaKnown RBP15.58■□□□□ 0.08
COL5A1-208ENST00000618395 SCARA3Q6AZY7 606 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms