RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TLK2Q86UE8 772 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ZCCHC7Q8N3Z6 543 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PRICKLE1Q96MT3 831 aaPredicted RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 APOL6Q9BWW8 343 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 IRF2BPLQ9H1B7 796 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 COPS7BQ9H9Q2 264 aaPredicted RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 GINM1Q9NU53 330 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ERVK-11Q9UQG0 969 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CPDO75976 1380 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 RPTORQ8N122 1335 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 RGPD1P0DJD0 1748 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 BTBD19C9JJ37 291 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PRPF3O43395 683 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 LRRN2O75325 713 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 KRT6AP02538 564 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 KRT6BP04259 564 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CPA3P15088 417 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 EIF2AK2P19525 551 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 IL4RP24394 825 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 SLC1A1P43005 524 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 FCHO2Q0JRZ9 810 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 KCNJ8Q15842 424 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 NEDD8Q15843 81 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 TXNRD1Q16881 649 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PROSER3Q2NL68 480 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PGS1Q32NB8 556 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PPP6R3Q5H9R7 873 aaPredicted RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 GALNT18Q6P9A2 607 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ELMOD2Q8IZ81 293 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 DEFB107AQ8IZN7 70 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 BLIDQ8IZY5 108 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 SPERTQ8NA61 448 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 MIGA1Q8NAN2 632 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 FAM172AQ8WUF8 416 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 C17orf80Q9BSJ5 609 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 EFHD1Q9BUP0 239 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CHID1Q9BWS9 393 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 HEMGNQ9BXL5 484 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 IMPG2Q9BZV3 1241 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CCDC177Q9NQR7 707 aaPredicted RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 GTF3C4Q9UKN8 822 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 RNF103-CHMP3A0A140T963 221 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 ANKRD34BA5PLL1 514 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 ITM2AO43736 263 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 MTRF1O75570 445 aaKnown RBP7.71□□□□□ -1.17
PDE6A-205ENST00000617647 TM7SF2O76062 418 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 TCN1P20061 433 aaPredicted RBP7.71□□□□□ -1.17
PDE6A-205ENST00000617647 NR2F2P24468 414 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 GNA11P29992 359 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 LIFRP42702 1097 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 TRAPPC10P48553 1259 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 GNA12Q03113 381 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 PDIA2Q13087 525 aaKnown RBP7.71□□□□□ -1.17
PDE6A-205ENST00000617647 IFIT5Q13325 482 aaKnown RBP7.71□□□□□ -1.17
PDE6A-205ENST00000617647 ART3Q13508 389 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 PCSK7Q16549 785 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 ZNF829Q3KNS6 432 aaPredicted RBP7.71□□□□□ -1.17
PDE6A-205ENST00000617647 SLC10A5Q5PT55 438 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 PPM1LQ5SGD2 360 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 LGSNQ5TDP6 509 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 NXNQ6DKJ4 435 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 RHOT2Q8IXI1 618 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 C10orf82Q8WW14 230 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 MRPL9Q9BYD2 267 aaKnown RBP7.71□□□□□ -1.17
PDE6A-205ENST00000617647 TTYH3Q9C0H2 523 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 GPAMQ9HCL2 828 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 MYH7BA7E2Y1 1941 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 NALCNQ8IZF0 1738 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 ZNF532Q9HCE3 1301 aa7.71□□□□□ -1.17
PDE6A-205ENST00000617647 FAM237BA0A1B0GVD1 139 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 SPDYE2BA6NHP3 402 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 A6NL46 340 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 TTC34A8MYJ7 566 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 DNALI1O14645 258 aaPredicted RBP7.71□□□□□ -1.18
PDE6A-205ENST00000617647 AIM2O14862 343 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 USP12O75317 370 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 SPDYE6P0CI01 402 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 BGNP21810 368 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 GTF2H1P32780 548 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 BLVRAP53004 296 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 NAPAP54920 295 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 KCNH2Q12809 1159 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 SPDYE2Q495Y8 402 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 DCAF6Q58WW2 860 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 AADACL2Q6P093 401 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 POTEAQ6S8J7 498 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 ADCK1Q86TW2 530 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 ALYREFQ86V81 257 aaKnown RBP7.71□□□□□ -1.18
PDE6A-205ENST00000617647 MAGEB6Q8N7X4 407 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 SCFD1Q8WVM8 642 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 GPKOWQ92917 476 aaPredicted RBP eCLIP7.71□□□□□ -1.18
PDE6A-205ENST00000617647 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 OLFM1Q99784 485 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 C1orf50Q9BV19 199 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 MAGEF1Q9HAY2 307 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 NINJ2Q9NZG7 142 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 GCNT4Q9P109 453 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 ATPIF1Q9UII2 106 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 PACSIN3Q9UKS6 424 aa7.71□□□□□ -1.18
PDE6A-205ENST00000617647 NR2E1Q9Y466 385 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms