RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 CYFIP2Q96F07 1278 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 TWNKQ96RR1 684 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 EIF3CQ99613 913 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 HNRNPABQ99729 332 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 MIS12Q9H081 205 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 PDCL3Q9H2J4 239 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 FNIP2Q9P278 1114 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 MTRRQ9UBK8 725 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 EPN1Q9Y6I3 576 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 O00370 1275 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 CCP110O43303 1012 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 TBC1D4O60343 1298 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 NDUFA10O95299 355 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 CTSAP10619 480 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 CDH5P33151 784 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-217ENST00000616545 PBX3P40426 434 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 KIF11P52732 1056 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 RABGGTBP53611 331 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 FMO1Q01740 532 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 KIAA0319Q5VV43 1072 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 SLC8B1Q6J4K2 584 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 ANKRD52Q8NB46 1076 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 KLHL23Q8NBE8 558 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 TMEM35BQ8NCS4 154 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 MSANTD4Q8NCY6 345 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 STK32AQ8WU08 396 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 RTP3Q9BQQ7 232 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.37□□□□□ -0.43
TARDBP-217ENST00000616545 ZCWPW1Q9H0M4 648 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
TARDBP-217ENST00000616545 MRPL17Q9NRX2 175 aaKnown RBP12.37□□□□□ -0.43
TARDBP-217ENST00000616545 HSFX1Q9UBD0 423 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 HMGXB4Q9UGU5 601 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
TARDBP-217ENST00000616545 LCHNA4D1U4 455 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 SOWAHDA6NJG2 315 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 CYP1A1P04798 512 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-217ENST00000616545 CA3P07451 260 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 BRD2P25440 801 aaKnown RBP12.36□□□□□ -0.43
TARDBP-217ENST00000616545 BCAT1P54687 386 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 GPR17Q13304 367 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 PSMD5Q16401 504 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 CFAP221Q4G0U5 840 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 RTP2Q5QGT7 225 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 ALKBH5Q6P6C2 394 aaKnown RBP12.36□□□□□ -0.43
TARDBP-217ENST00000616545 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-217ENST00000616545 RIN2Q8WYP3 895 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-217ENST00000616545 TFAP2BQ92481 460 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 TRIM11Q96F44 468 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 PKMYT1Q99640 499 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 LMAN2LQ9H0V9 348 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 ZBP1Q9H171 429 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 RXFP1Q9HBX9 757 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 CRTAC1Q9NQ79 661 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 CYLDQ9NQC7 956 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 NAGPAQ9UK23 515 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 NME7Q9Y5B8 376 aa12.36□□□□□ -0.43
TARDBP-217ENST00000616545 A0A087X0T9 212 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 H3BNC9 293 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 DDX3XO00571 662 aaKnown RBP eCLIP12.35□□□□□ -0.433e-30■■■■■ 33.2
TARDBP-217ENST00000616545 RTN2O75298 545 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 MMEP08473 750 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 PLEKP08567 350 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-217ENST00000616545 FAM228BP0C875 321 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 CHRNB2P17787 502 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 CENPCQ03188 943 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 TAP1Q03518 808 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
TARDBP-217ENST00000616545 CLEC16AQ2KHT3 1053 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 PKDCCQ504Y2 493 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 PPP1R26Q5T8A7 1209 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-217ENST00000616545 TPGS2Q68CL5 300 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 ACAD10Q6JQN1 1059 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 RAD9BQ6WBX8 426 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
TARDBP-217ENST00000616545 OR10T2Q8NGX3 314 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SPPL3Q8TCT6 385 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SPPL2BQ8TCT7 592 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 CALR3Q96L12 384 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms