RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TUBB3Q13509 450 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 HABP2Q14520 560 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 EZH2Q15910 746 aaKnown RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 SRSF7Q16629 238 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 TXNRD1Q16881 649 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 PGS1Q32NB8 556 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 CD300EQ496F6 205 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 TEDDM1Q5T9Z0 273 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 KAZNQ674X7 775 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 HEATR3Q7Z4Q2 680 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 PEG10Q86TG7 708 aaKnown RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 CCDC146Q8IYE0 955 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 MYCBPAPQ8TBZ2 947 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 BRIX1Q8TDN6 353 aaKnown RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 LPIN2Q92539 896 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 GPATCH3Q96I76 525 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 PBKQ96KB5 322 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 TIMP4Q99727 224 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 VKORC1Q9BQB6 163 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 TINAGL1Q9GZM7 467 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 SLC52A1Q9NWF4 448 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 VSX1Q9NZR4 365 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 CHPF2Q9P2E5 772 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 ARPP21Q9UBL0 812 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 ABCF2Q9UG63 623 aa3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 LUC7L2Q9Y383 392 aaKnown RBP3.26□□□□□ -1.89
HMGB1P24-202ENST00000615653 WDR27A2RRH5 827 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 URI1O94763 535 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 NXPH3O95157 252 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MAP4K4O95819 1239 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 TYRP14679 529 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 PPP3CBP16298 524 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 LPOP22079 712 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MCCP23508 829 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 GATA3P23771 443 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MAP2K6P52564 334 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 RAPGEF1Q13905 1077 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 EMC10Q5UCC4 262 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 WDR78Q5VTH9 848 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 PPP1R32Q7Z5V6 425 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 TMTC2Q8N394 836 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 PSD4Q8NDX1 1056 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 TOR1AIP2Q8NFQ8 470 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 SLC30A5Q8TAD4 765 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 DDB2Q92466 427 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 SARAFQ96BY9 339 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MTFMTQ96DP5 389 aaKnown RBP3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MVB12AQ96EY5 273 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 CDK5RAP3Q96JB5 506 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 PKNOX2Q96KN3 472 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 C1orf43Q9BWL3 253 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 VPS33BQ9H267 617 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MRPL46Q9H2W6 279 aaKnown RBP3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 KLC4Q9NSK0 619 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 EHD3Q9NZN3 535 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 ANKRD6Q9Y2G4 727 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 PCDHA3Q9Y5H8 950 aa3.25□□□□□ -1.89
HMGB1P24-202ENST00000615653 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 LRRC14BA6NHZ5 514 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 F5H697 171 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 OFD1O75665 1012 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 ABLIM3O94929 683 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 GPD1P21695 349 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 CCT4P50991 539 aaKnown RBP3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 OS9Q13438 667 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 BIRC2Q13490 618 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 PIN1Q13526 163 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 PLAC9Q5JTB6 97 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 FAM160B1Q5W0V3 765 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 FAM109AQ8N4B1 249 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 PNISRQ8TF01 805 aaKnown RBP3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 DPF1Q92782 380 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 AIFM3Q96NN9 605 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 MOGAT1Q96PD6 335 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 CAMKK2Q96RR4 588 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 MAP3K14Q99558 947 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 GTPBP4Q9BZE4 634 aaKnown RBP3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 SLAMF7Q9NQ25 335 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 AASDHPPTQ9NRN7 309 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 PNPOQ9NVS9 261 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 WWOXQ9NZC7 414 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 PNMA8BQ9ULN7 279 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 STXBP5LQ9Y2K9 1186 aa3.24□□□□□ -1.89
HMGB1P24-202ENST00000615653 ADGRA2Q96PE1 1338 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 PRSS29PA6NIE9 313 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 ADM5C9JUS6 153 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 M0QYG6 137 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 PRC1O43663 620 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 PLIN1O60240 522 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 TTLL1O95922 423 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 CHRM2P08172 466 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 CT47B1P0C2W7 299 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 ATXN1LP0C7T5 689 aaKnown RBP3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 PF4V1P10720 104 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 CD6P30203 668 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 GCLCP48506 637 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 LOXL3P58215 753 aa3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 NKX6-1P78426 367 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P24-202ENST00000615653 FAM153CQ494X1 144 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms