RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 PPM1AP35813 382 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 NRIP1P48552 1158 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 NDST1P52848 882 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 PTK2Q05397 1052 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 KLHL30Q0D2K2 578 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 ASTE1Q2TB18 679 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TDRD12Q587J7 1177 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TAF3Q5VWG9 929 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 DCLRE1AQ6PJP8 1040 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 EP400NLQ6ZTU2 488 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 ADGRF2Q8IZF7 708 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TOP6BLQ8N6T0 577 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF397Q8NF99 534 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TFAP2BQ92481 460 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 FAXDC2Q96IV6 333 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 MSLNLQ96KJ4 702 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 SUSD3Q96L08 255 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 MMS19Q96T76 1030 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 PCDHB18PQ96TA0 734 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 BAG1Q99933 345 aaPredicted RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 RTP3Q9BQQ7 232 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM175Q9BSA9 504 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 TLR9Q9NR96 1032 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 REXO2Q9Y3B8 237 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 R3HCC1Q9Y3T6 440 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 MYO16Q9Y6X6 1858 aa8.57□□□□□ -1.04
PCDH9-205ENST00000614931 SPTBN5Q9NRC6 3674 aaKnown RBP8.57□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF638Q14966 1978 aaKnown RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 A0A0U1RQJ8 604 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 FAM170AA1A519 330 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 DDX3XO00571 662 aaKnown RBP eCLIP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 GABRDO14764 452 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 MBTPS2O43462 519 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 HUS1O60921 280 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 TACC1O75410 805 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 GLP2RO95838 553 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CYP11A1P05108 521 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 P4HA1P13674 534 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CYP11B1P15538 503 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 ACAT1P24752 427 aaKnown RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 TKTP29401 623 aaKnown RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CDK17Q00537 523 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 FMO1Q01740 532 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 KRT17Q04695 432 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 DUSP6Q16828 381 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 FUT10Q6P4F1 479 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CYP26C1Q6V0L0 522 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 DSTYKQ6XUX3 929 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 TOGARAM2Q6ZUX3 1019 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 TAS1R1Q7RTX1 841 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 DNAAF5Q86Y56 855 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 RNF168Q8IYW5 571 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 SLC39A11Q8N1S5 342 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 ACRBPQ8NEB7 543 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 MICAL1Q8TDZ2 1067 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 ATRIPQ8WXE1 791 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.044e-7■■■■□ 22.2
PCDH9-205ENST00000614931 JAKMIP2Q96AA8 810 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 B3GALT6Q96L58 329 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 FAM81BQ96LP2 452 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM209Q96SK2 561 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CDCA3Q99618 268 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 DESI2Q9BSY9 194 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 TLE6Q9H808 572 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 NHEJ1Q9H9Q4 299 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 SPTLC3Q9NUV7 552 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CLEC1BQ9P126 229 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 PRKAG3Q9UGI9 489 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 PUF60Q9UHX1 559 aaKnown RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 CD207Q9UJ71 328 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 ADAM28Q9UKQ2 775 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 BARX2Q9UMQ3 279 aaPredicted RBP8.56□□□□□ -1.04
PCDH9-205ENST00000614931 PCDHB8Q9UN66 801 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 FAM50BQ9Y247 325 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 FAN1Q9Y2M0 1017 aa8.56□□□□□ -1.04
PCDH9-205ENST00000614931 A0A087X0T9 212 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 SSU72P8A0A1W2PR75 194 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 CARNS1A5YM72 827 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 C19orf67A6NJJ6 358 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 PER2O15055 1255 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ARHGAP6O43182 974 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ATP2C2O75185 946 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 MMEP08473 750 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 PDGFRBP09619 1106 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 FAM228BP0C875 321 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ODC1P11926 461 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TYMPP19971 482 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 GNA15P30679 374 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ALDH7A1P49419 539 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 NDUFV1P49821 464 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms