RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	MROH7-TTC4	A0A0A0MT08	1334 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	MYO9B	Q13459	2157 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	CHRM3	P20309	590 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	RPS7	P62081	194 aa	Known RBP	12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	PPIL2	Q13356	520 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	SCAI	Q8N9R8	606 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	ANKRD27	Q96NW4	1050 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	AP1M1	Q9BXS5	423 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	MAN1B1	Q9UKM7	699 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	SOX13	Q9UN79	622 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	COL15A1	P39059	1388 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	LOC102724159	A0A0B4J2E5	919 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	ATP2C1	P98194	919 aa	Predicted RBP	12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	CASP8	Q14790	479 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	PWP2	Q15269	919 aa	Known RBP	12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	ZNF827	Q17R98	1081 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	PEG10	Q86TG7	708 aa	Known RBP	12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	DYDC2	Q96IM9	177 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	SERAC1	Q96JX3	654 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	NMRK2	Q9NPI5	230 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	TBC1D23	Q9NUY8	699 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	TNFSF13B	Q9Y275	285 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	KLRC2	P26717	231 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	HMGCS2	P54868	508 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	TUBGCP3	Q96CW5	907 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	REXO4	Q9GZR2	422 aa	Known RBP	12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	NDOR1	Q9UHB4	597 aa		12.69	□□□□□ -0.38
ABCA2-223	ENST00000614293	HBP1	O60381	514 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	MMP14	P50281	582 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	SERPINB9	P50453	376 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	ITGAD	Q13349	1161 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	MAGEC3	Q8TD91	643 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	PANX2	Q96RD6	677 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	SEPT3	Q9UH03	358 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	PADI4	Q9UM07	663 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	AGAP1	Q9UPQ3	857 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	CRYL1	Q9Y2S2	319 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	SAC3D1	A6NKF1	404 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	TRIM13	O60858	407 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	ANXA9	O76027	345 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	ITGAX	P20702	1163 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	PLA2G4A	P47712	749 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	DYNLL2	Q96FJ2	89 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	KLHL28	Q9NXS3	571 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	ERVK-7	P63135	1459 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	MET	P08581	1390 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	STRN	O43815	780 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	KLC1	Q07866	573 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	SEC31B	Q9NQW1	1179 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	IGSF9B	Q9UPX0	1349 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	SMIM31	A0A1B0GVY4	71 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	DGAT1	O75907	488 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	GRAMD1A	Q96CP6	724 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	ATXN7L3B	Q96GX2	97 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	CLCC1	Q96S66	551 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	GAS2L1	Q99501	681 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	ZNF711	Q9Y462	761 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	PCDHGB3	Q9Y5G1	929 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	RNF103	O00237	685 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	SH2B2	O14492	632 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	MTA2	O94776	668 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	NUDT14	O95848	222 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	XKR3	Q5GH77	459 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	CNBD2	Q96M20	576 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	RGS18	Q9NS28	235 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	TMEM51	Q9NW97	253 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	CAPN1	P07384	714 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	EN1	Q05925	392 aa	Predicted RBP	12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	LCORL	Q8N3X6	602 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	KCNS3	Q9BQ31	491 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	MIEF1	Q9NQG6	463 aa		12.68	□□□□□ -0.38
ABCA2-223	ENST00000614293	POLB	P06746	335 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	APRT	P07741	180 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	CLTB	P09497	229 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	CYP2C9	P11712	490 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	KCNK10	P57789	538 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	IL2	P60568	153 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	CREM	Q03060	361 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	ARHGEF26	Q96DR7	871 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	EIF2AK1	Q9BQI3	630 aa	Known RBP	12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	KLC4	Q9NSK0	619 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	VTI1B	Q9UEU0	232 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	NCAM1	P13591	858 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	MUT	P22033	750 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	PDX1	P52945	283 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	PDIA2	Q13087	525 aa	Known RBP	12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	FAM173B	Q6P4H8	233 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	P3H2	Q8IVL5	708 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	CHST13	Q8NET6	341 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	CLMN	Q96JQ2	1002 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	C11orf70	Q9BRQ4	267 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	STARD7	Q9NQZ5	370 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	MGAT4D	A6NG13	374 aa		12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	GCLC	P48506	637 aa	Predicted RBP	12.67	□□□□□ -0.38
ABCA2-223	ENST00000614293	MRPS35	P82673	323 aa	Known RBP	12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms