RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MIS18BP1Q6P0N0 1132 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SHOC2Q9UQ13 582 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ATP7AQ04656 1500 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 UMODL1Q5DID0 1318 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 M0QZ92 97 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ASS1P00966 412 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 SPICE1Q8N0Z3 855 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 XXYLT1Q8NBI6 393 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 GIPC3Q8TF64 312 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ANKS1AQ92625 1134 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 APOL6Q9BWW8 343 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 EXOSC4Q9NPD3 245 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 LONRF1Q17RB8 773 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SEL1L3Q68CR1 1132 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 RWDD4Q6NW29 188 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ZNF662Q6ZS27 426 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 CLVS1Q8IUQ0 354 aaPredicted RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 OXNAD1Q96HP4 312 aaPredicted RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 CLK4Q9HAZ1 481 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 COPZ1P61923 177 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 SLC29A2Q14542 456 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 FGD2Q7Z6J4 655 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 PPHLN1Q8NEY8 458 aaKnown RBP9.12□□□□□ -0.95
TTC28-208ENST00000612946 CCSER1Q9C0I3 900 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 COMMD8Q9NX08 183 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 ATP10BO94823 1461 aa9.12□□□□□ -0.95
TTC28-208ENST00000612946 TMEM253P0C7T8 217 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 QPRTQ15274 297 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 FAM98BQ52LJ0 330 aaKnown RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 C11orf63Q6NUN7 778 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 CDC73Q6P1J9 531 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 PDXKO00764 312 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 GYPCP04921 128 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 CYP21A2P08686 494 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 RRM2P31350 389 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 CDK7P50613 346 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ATP2C1P98194 919 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 KIAA0408Q6ZU52 694 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 LINC00523Q86TU6 105 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 CASKIN2Q8WXE0 1202 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 FAM92AA1XBS5 289 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 LRRIQ4A6NIV6 560 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 RNMTO43148 476 aaKnown RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 IFNA16P05015 189 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 TPTE2Q6XPS3 522 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 GRIP2Q9C0E4 1043 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 STAP1Q9ULZ2 295 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 AFF2P51816 1311 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 MAFGO15525 162 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 JAK3P52333 1124 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 CNKSR1Q969H4 720 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 FIS1Q9Y3D6 152 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 SPDYE2BA6NHP3 402 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 TIMM44O43615 452 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 NCK2O43639 380 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ZBED4O75132 1171 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 SPDYE6P0CI01 402 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 BCAR1P56945 870 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 PDK3Q15120 406 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 EAPPQ56P03 285 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 MYDGFQ969H8 173 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 GGA1Q9UJY5 639 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 MAGEB16A2A368 324 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ZSCAN9O15535 394 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 VAV1P15498 845 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 TRIM49BA6NDI0 452 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 TRIM49D1C9J1S8 452 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 CRKP46108 304 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ANXA11P50995 505 aaKnown RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 ITGADQ13349 1161 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 XKR9Q5GH70 373 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 C6orf10Q5SRN2 563 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ZNF544Q6NX49 715 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 MTDHQ86UE4 582 aaKnown RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 REXO1L1PQ8IX06 675 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 AHI1Q8N157 1196 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 OSBPL6Q9BZF3 934 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ANKRD6Q9Y2G4 727 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 SNX13Q9Y5W8 968 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ADAMTS12P58397 1594 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 KPNA3O00505 521 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 GDF11O95390 407 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 SEC24AO95486 1093 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 SLC4A1P02730 911 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ARHGEF16Q5VV41 709 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 HEATR4Q86WZ0 1026 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 C17orf80Q9BSJ5 609 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 H2AFY2Q9P0M6 372 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 UGGT1Q9NYU2 1555 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ECDO95905 644 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 CHI3L2Q15782 390 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms