RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 M0QYV0 167 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 KRT86O43790 486 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 MICAL2O94851 1124 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 UNGP13051 313 aaPredicted RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 CCDC130P13994 396 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 ATP2A2P16615 1042 aaKnown RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 PTPN1P18031 435 aaKnown RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 NSFP46459 744 aaKnown RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 CDR1P51861 262 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 GALCP54803 685 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 NOMO3P69849 1222 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 ACAD10Q6JQN1 1059 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 THEM5Q8N1Q8 247 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 SPATA18Q8TC71 538 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 BCL7CQ8WUZ0 217 aaPredicted RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 ZNF558Q96NG5 402 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 SLC9A7Q96T83 725 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 SYT15Q9BQS2 421 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 ISCUQ9H1K1 167 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 GUCA1BQ9UMX6 200 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 DUSP10Q9Y6W6 482 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 ZNF500O60304 480 aaPredicted RBP18.61■□□□□ 0.57
SREK1-216ENST00000612404 LSM8O95777 96 aaKnown RBP18.61■□□□□ 0.57
SREK1-216ENST00000612404 ADORA2BP29275 332 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 STILQ15468 1287 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 GOLGA7BQ2TAP0 167 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 MDH1BQ5I0G3 518 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 KIAA0319Q5VV43 1072 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 LCLAT1Q6UWP7 414 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 HERC6Q8IVU3 1022 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 TMEM35BQ8NCS4 154 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 C1orf131Q8NDD1 294 aaKnown RBP18.61■□□□□ 0.57
SREK1-216ENST00000612404 B3GALT6Q96L58 329 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 TSGA10Q9BZW7 698 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 CDH9Q9ULB4 789 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 INSL6Q9Y581 213 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 SYN3O14994 580 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 LAG3P18627 525 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 ELAVL2Q12926 359 aaKnown RBP18.61■□□□□ 0.57
SREK1-216ENST00000612404 CCDC142Q17RM4 750 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 UBA3Q8TBC4 463 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 CTNNBL1Q8WYA6 563 aaPredicted RBP18.61■□□□□ 0.57
SREK1-216ENST00000612404 C16orf45Q96MC5 204 aaPredicted RBP18.61■□□□□ 0.57
SREK1-216ENST00000612404 RTP3Q9BQQ7 232 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 HESX1Q9UBX0 185 aa18.61■□□□□ 0.57
SREK1-216ENST00000612404 MACROD2A1Z1Q3 448 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 ANKRD62A6NC57 917 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 HTRA4P83105 476 aaPredicted RBP18.6■□□□□ 0.57
SREK1-216ENST00000612404 CENPCQ03188 943 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 SLC2A14Q8TDB8 520 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 IGSF21Q96ID5 467 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 THAP2Q9H0W7 228 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 LHX5Q9H2C1 402 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 CRTAC1Q9NQ79 661 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 INTUQ9ULD6 942 aa18.6■□□□□ 0.57
SREK1-216ENST00000612404 PJA2O43164 708 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 TLL1O43897 1013 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 MAGEA10P43363 369 aaPredicted RBP18.59■□□□□ 0.57
SREK1-216ENST00000612404 VARS2Q5ST30 1063 aaKnown RBP18.59■□□□□ 0.57
SREK1-216ENST00000612404 ARHGAP17Q68EM7 881 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 COLGALT1Q8NBJ5 622 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 PHOSPHO2Q8TCD6 241 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 RAD9AQ99638 391 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 ZNF518BQ9C0D4 1074 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 MYBPHLA2RUH7 354 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 TSPY1Q01534 308 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 C2CD6Q53TS8 623 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 ZNF662Q6ZS27 426 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 WDTC1Q8N5D0 677 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 OR10T2Q8NGX3 314 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 MED10Q9BTT4 135 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 GTF3C4Q9UKN8 822 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 PAXBP1Q9Y5B6 917 aa18.59■□□□□ 0.57
SREK1-216ENST00000612404 VWA8A3KMH1 1905 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 OAZ2O95190 189 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 TMEM253P0C7T8 217 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 FGFR3P22607 806 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 NAP1L1P55209 391 aaKnown RBP18.58■□□□□ 0.57
SREK1-216ENST00000612404 PTPN14Q15678 1187 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 INTS6LQ5JSJ4 861 aaKnown RBP18.58■□□□□ 0.57
SREK1-216ENST00000612404 C9orf50Q5SZB4 431 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.58■□□□□ 0.57
SREK1-216ENST00000612404 TAS1R1Q7RTX1 841 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 SECISBP2LQ93073 1101 aaKnown RBP18.58■□□□□ 0.57
SREK1-216ENST00000612404 TMEM169Q96HH4 297 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 TMEM209Q96SK2 561 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 C11orf70Q9BRQ4 267 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 AAASQ9NRG9 546 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 ADAM22Q9P0K1 906 aa18.58■□□□□ 0.57
SREK1-216ENST00000612404 CLDN5O00501 218 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 ATMINO43313 823 aaPredicted RBP18.58■□□□□ 0.56
SREK1-216ENST00000612404 CDH5P33151 784 aaPredicted RBP18.58■□□□□ 0.56
SREK1-216ENST00000612404 PPP1R2P3Q6NXS1 205 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 TTC30AQ86WT1 665 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 MCOLN2Q8IZK6 566 aa18.58■□□□□ 0.56
SREK1-216ENST00000612404 SLC39A11Q8N1S5 342 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms