RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.04□□□□□ -0.32
TP53-219ENST00000610538 F8VP50 259 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 F8W810 466 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 ARVCFO00192 962 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 KRIT1O00522 736 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 XPOTO43592 962 aaKnown RBP13.04□□□□□ -0.32
TP53-219ENST00000610538 GRAP2O75791 330 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 MTA2O94776 668 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 ERBB2P04626 1255 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 MYBL1P10243 752 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 VDRP11473 427 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 CCDC130P13994 396 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 LONRF2Q1L5Z9 754 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 ATP13A4Q4VNC1 1196 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 PLEKHA7Q6IQ23 1121 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
TP53-219ENST00000610538 TRIM11Q96F44 468 aa13.04□□□□□ -0.32
TP53-219ENST00000610538 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■□□□ 12.8
TP53-219ENST00000610538 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
TP53-219ENST00000610538 AVENQ9NQS1 362 aaPredicted RBP13.04□□□□□ -0.32
TP53-219ENST00000610538 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 PGRMC1O00264 195 aaKnown RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 CYB561D2O14569 222 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 HUS1O60921 280 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 LSM8O95777 96 aaKnown RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 ADORA2BP29275 332 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 GPD2P43304 727 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 PEX5P50542 639 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 OGDHQ02218 1023 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 CNGA2Q16280 664 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 UBL4BQ8N7F7 174 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 FEZF2Q8TBJ5 459 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 C18orf8Q96DM3 657 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 VCPIP1Q96JH7 1222 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 RPGRIP1Q96KN7 1286 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 MRPL47Q9HD33 250 aaKnown RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 KLHL11Q9NVR0 708 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 A0A0U1RQG5 324 aaPredicted RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 TCRBV7S2A1N4TA0A589 114 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 ESYT3A0FGR9 886 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 STAU1O95793 577 aaKnown RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 TCEAL1Q15170 157 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 TRADDQ15628 312 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 SMYD5Q6GMV2 418 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 CD101Q93033 1021 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
TP53-219ENST00000610538 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 RSAD1Q9HA92 442 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
TP53-219ENST00000610538 B3GAT3O94766 335 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 CALB1P05937 261 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 RABGGTBP53611 331 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 TAS2R40P59535 323 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 PDCLQ13371 301 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 PMF1Q6P1K2 205 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 TTC30AQ86WT1 665 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 HACE1Q8IYU2 909 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 ADGRF2Q8IZF7 708 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 JOSD2Q8TAC2 188 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 ACTRT1Q8TDG2 376 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 LHX5Q9H2C1 402 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 RNF14Q9UBS8 474 aa13.02□□□□□ -0.32
TP53-219ENST00000610538 E5RJQ4 531 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 PFKMP08237 780 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 KRT3P12035 628 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 TAF5Q15542 800 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 C8orf74Q6P047 294 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 TRAF7Q6Q0C0 670 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 ZNF560Q96MR9 790 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 B3GNT5Q9BYG0 378 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 AMACRQ9UHK6 382 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 PCDHA3Q9Y5H8 950 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 TET1Q8NFU7 2136 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 CDH23Q9H251 3354 aa13.02□□□□□ -0.33
TP53-219ENST00000610538 TMEM191CA6NGB0 347 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 CLDN5O00501 218 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 PODXLO00592 558 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 GLI1P08151 1106 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 MYBL2P10244 700 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 CCL5P13501 91 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 CDH5P33151 784 aaPredicted RBP13.01□□□□□ -0.33
TP53-219ENST00000610538 ZNF252P-AS1Q0IIN9 211 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 DSC3Q14574 896 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 SV2CQ496J9 727 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 TMCO3Q6UWJ1 677 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 OSTM1Q86WC4 334 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
TP53-219ENST00000610538 FAXDC2Q96IV6 333 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms