RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 CBWD2Q8IUF1 395 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 OR5B17Q8NGF7 314 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 RUBCNQ92622 972 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 NELL1Q92832 810 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 SLC46A2Q9BY10 475 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 TRIM9Q9C026 710 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 RBM12Q9NTZ6 932 aaKnown RBP17.21■□□□□ 0.35
SGMS1-209ENST00000609445 DDX43Q9NXZ2 648 aaKnown RBP17.21■□□□□ 0.35
SGMS1-209ENST00000609445 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
SGMS1-209ENST00000609445 LILRB5O75023 590 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 TDGF1P13385 188 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 CYP2F1P24903 491 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 ASIC1P78348 528 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 RBP5P82980 135 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 GAS6Q14393 721 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 DDR2Q16832 855 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 INTS6LQ5JSJ4 861 aaKnown RBP17.2■□□□□ 0.34
SGMS1-209ENST00000609445 BPIFB1Q8TDL5 484 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 C8orf33Q9H7E9 229 aaPredicted RBP17.2■□□□□ 0.34
SGMS1-209ENST00000609445 GDAP2Q9NXN4 497 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 OBP2AQ9NY56 170 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 GTF3C4Q9UKN8 822 aa17.2■□□□□ 0.34
SGMS1-209ENST00000609445 MAGED2Q9UNF1 606 aaPredicted RBP17.2■□□□□ 0.34
SGMS1-209ENST00000609445 ATG2BQ96BY7 2078 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 SPECC1L-ADORA2AF8WAN1 911 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 CUTAO60888 179 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 YEATS4O95619 227 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 CASP1P29466 404 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 WEE1P30291 646 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 CTHP32929 405 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 MLLT6P55198 1093 aaPredicted RBP17.19■□□□□ 0.34
SGMS1-209ENST00000609445 NLRP12P59046 1061 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 MYL7Q01449 175 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 SATB1Q01826 763 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 SOWAHAQ2M3V2 549 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 Q6ZS52 159 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 STXBP4Q6ZWJ1 553 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 ADGRF2Q8IZF7 708 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 TMEM86AQ8N2M4 240 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 LEO1Q8WVC0 666 aaPredicted RBP17.19■□□□□ 0.34
SGMS1-209ENST00000609445 SNX21Q969T3 373 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 ANKRD36BP1Q96IX9 119 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 PKMYT1Q99640 499 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 ACBD6Q9BR61 282 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 INTS13Q9NVM9 706 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 HSPBP1Q9NZL4 362 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
SGMS1-209ENST00000609445 CCL26Q9Y258 94 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 ANAPC1Q9H1A4 1944 aa17.19■□□□□ 0.34
SGMS1-209ENST00000609445 GREB1Q4ZG55 1949 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 MYBPHLA2RUH7 354 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 ATP2C2O75185 946 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 PON2Q15165 354 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 NFE2Q16621 373 aaPredicted RBP17.18■□□□□ 0.34
SGMS1-209ENST00000609445 FAM26FQ5R3K3 315 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 TXNDC8Q6A555 127 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 EPM2AIP1Q7L775 607 aaPredicted RBP17.18■□□□□ 0.34
SGMS1-209ENST00000609445 CMTM8Q8IZV2 173 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 TOP6BLQ8N6T0 577 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
SGMS1-209ENST00000609445 RIN3Q8TB24 985 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 RMDN1Q96DB5 314 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 CUEDC2Q9H467 287 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 GKN1Q9NS71 199 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 NCDNQ9UBB6 729 aa17.18■□□□□ 0.34
SGMS1-209ENST00000609445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-209ENST00000609445 GABRDO14764 452 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
SGMS1-209ENST00000609445 EIF3DO15371 548 aaKnown RBP eCLIP17.17■□□□□ 0.34
SGMS1-209ENST00000609445 TADA3O75528 432 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 TNNC2P02585 160 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 CSH1P0DML2 217 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 CSH2P0DML3 217 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 ZSCAN22P10073 491 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-209ENST00000609445 CCR3P51677 355 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 AMPD3Q01432 767 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 MAMSTRQ6ZN01 415 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 RALGPS2Q86X27 583 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-209ENST00000609445 NELFCDQ8IXH7 590 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 IQUBQ8NA54 791 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 RDH13Q8NBN7 331 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 ZNF507Q8TCN5 953 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 KBTBD7Q8WVZ9 684 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 USP13Q92995 863 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-209ENST00000609445 MSANTD3Q96H12 275 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 HPDLQ96IR7 371 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 IER2Q9BTL4 223 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 EPC1Q9H2F5 836 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 BLZF1Q9H2G9 400 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 C2orf42Q9NWW7 574 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 PTPRDP23468 1912 aa17.17■□□□□ 0.34
SGMS1-209ENST00000609445 CLIC2O15247 247 aa17.16■□□□□ 0.34
SGMS1-209ENST00000609445 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms