RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PDK1Q15118 436 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 OR8H2Q8N162 312 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 DNAJC7Q99615 494 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 RIC8BQ9NVN3 520 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 STRNO43815 780 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 COILP38432 576 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PPIL6Q8IXY8 311 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 CENPLQ8N0S6 344 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 KLHL25Q9H0H3 589 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 ALG6Q9Y672 507 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PLA2G4FQ68DD2 849 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 SLC44A2Q8IWA5 706 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PPP1R2P1Q96PQ5 205 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 DEPDC7Q96QD5 511 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 NT5C1AQ9BXI3 368 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 CARD9Q9H257 536 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 DIABLOQ9NR28 239 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PHTF1Q9UMS5 762 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 NCAM1P13591 858 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 GPD1P21695 349 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 CLEC16AQ2KHT3 1053 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 LRRC8DQ7L1W4 858 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 MGAT5BQ3V5L5 792 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 RARBP10826 455 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PTK6Q13882 451 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 SKIV2LQ15477 1246 aaKnown RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 FAM111AQ96PZ2 611 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 LSM7Q9UK45 103 aaKnown RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 RNF112Q9ULX5 631 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 KDM6BO15054 1643 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 METP08581 1390 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 CHI3L1P36222 383 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 FAM83EQ2M2I3 478 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 ARID3BQ8IVW6 561 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 KIRREL3Q8IZU9 778 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 MRPS26Q9BYN8 205 aaKnown RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 GYPCP04921 128 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PRIM2P49643 509 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 CROCC2H7BZ55 1655 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 C10orf53Q8N6V4 93 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 VPS37AQ8NEZ2 397 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SERPINB12Q96P63 405 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 ILKAPQ9H0C8 392 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 CDC16Q13042 620 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 ZNF669Q96BR6 464 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 23.2
USP6NL-205ENST00000609104 F8W810 466 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SPAG6O75602 509 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 UPP2O95045 317 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 MTMR2Q13614 643 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 PIF1Q9H611 641 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 UGGT1Q9NYU2 1555 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 PTGISQ16647 500 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 KCNV1Q6PIU1 500 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 TRPC5OSA6NMA1 111 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 ADSSL1Q8N142 457 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 GOLGA8TH3BQL2 631 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 TC2NQ8N9U0 490 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 USP38Q8NB14 1042 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 RBBP8Q99708 897 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 ARHGEF3Q9NR81 526 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SYBUQ9NX95 663 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SKAP2O75563 359 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 NOA1Q8NC60 698 aaKnown RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 CENPTQ96BT3 561 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 PAPOLBQ9NRJ5 636 aaKnown RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 NCF1BA6NI72 391 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 NCF1CA8MVU1 366 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 DDHD2O94830 711 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 NCF1P14598 390 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-205ENST00000609104 PGS1Q32NB8 556 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 EPC2Q52LR7 807 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 TMEM8AQ9HCN3 771 aa13.59□□□□□ -0.23
USP6NL-205ENST00000609104 FOXO4P98177 505 aa13.58□□□□□ -0.23
USP6NL-205ENST00000609104 PMPCBO75439 489 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 RHOBTB3O94955 611 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 ANKRD7Q92527 254 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 PTGER2P43116 358 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 SCARF1Q14162 830 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 LRRC34Q8IZ02 419 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 LRRC71Q8N4P6 559 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 STKLD1Q8NE28 680 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms