RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SPOPO43791 374 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 IGFBP6P24592 240 aaPredicted RBP22.85■■□□□ 1.25
USP6NL-204ENST00000606752 SLC1A1P43005 524 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 TUSC3Q13454 348 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 ARHGAP17Q68EM7 881 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 GLB1LQ6UWU2 654 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 GPR161Q8N6U8 529 aaKnown RBP22.85■■□□□ 1.25
USP6NL-204ENST00000606752 UBL4BQ8N7F7 174 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 SPATA4Q8NEY3 305 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 UBA3Q8TBC4 463 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 CD101Q93033 1021 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 CPXM1Q96SM3 734 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 TRIM7Q9C029 511 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 DPEP3Q9H4B8 488 aa22.85■■□□□ 1.25
USP6NL-204ENST00000606752 CEP104O60308 925 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 TAP1Q03518 808 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 GOLGA7BQ2TAP0 167 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 WSCD1Q658N2 575 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 DNAJC24Q6P3W2 148 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 NOA1Q8NC60 698 aaKnown RBP22.84■■□□□ 1.25
USP6NL-204ENST00000606752 C3orf20Q8ND61 904 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 DBF4BQ8NFT6 615 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 ACTRT1Q8TDG2 376 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 ANKRD7Q92527 254 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 TNIP3Q96KP6 325 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 CARD9Q9H257 536 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 SMARCAL1Q9NZC9 954 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 EHD2Q9NZN4 543 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 WDR35Q9P2L0 1181 aa22.84■■□□□ 1.25
USP6NL-204ENST00000606752 DCDC2CA8MYV0 355 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 GABRDO14764 452 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 COL6A1P12109 1028 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 PAX3P23760 479 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 AARSP49588 968 aaKnown RBP eCLIP22.83■■□□□ 1.25
USP6NL-204ENST00000606752 PDCLQ13371 301 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 PKDCCQ504Y2 493 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 CYP4A22Q5TCH4 519 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 C3orf58Q8NDZ4 430 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 SEPT8Q92599 483 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 UROC1Q96N76 676 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 TOX2Q96NM4 488 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 SYNCQ9H7C4 482 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 FAM49BQ9NUQ9 324 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 HESX1Q9UBX0 185 aa22.83■■□□□ 1.25
USP6NL-204ENST00000606752 CCDC66A2RUB6 948 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 TMEM191CA6NGB0 347 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 HCRTO43612 131 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 PROSCO94903 275 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 GABRB2P47870 512 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 GSCP56915 257 aaPredicted RBP22.82■■□□□ 1.24
USP6NL-204ENST00000606752 ZNF268Q14587 947 aaPredicted RBP22.82■■□□□ 1.24
USP6NL-204ENST00000606752 PPP1R15BQ5SWA1 713 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 DSTYKQ6XUX3 929 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 OSTM1Q86WC4 334 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 TMEM86AQ8N2M4 240 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 RASGEF1CQ8N431 466 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 PAAF1Q9BRP4 392 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 LCMT1Q9UIC8 334 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 ENPP3O14638 875 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 PFKMP08237 780 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 CTNNA2P26232 953 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 CTNNA1P35221 906 aaKnown RBP22.82■■□□□ 1.24
USP6NL-204ENST00000606752 PEX5P50542 639 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 C1orf53Q5VUE5 145 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 ALG3Q92685 438 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 KRT35Q92764 455 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 APBB2Q92870 758 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 MIS12Q9H081 205 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 HIPK3Q9H422 1215 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 TMEM161AQ9NX61 479 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 IP6K2Q9UHH9 426 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 PCDHA3Q9Y5H8 950 aa22.82■■□□□ 1.24
USP6NL-204ENST00000606752 B3GAT3O94766 335 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 GJB6O95452 261 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 SETSIPP0DME0 302 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 LHX1P48742 406 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 RNASE9P60153 205 aaKnown RBP22.81■■□□□ 1.24
USP6NL-204ENST00000606752 PSMC1P62191 440 aaKnown RBP22.81■■□□□ 1.24
USP6NL-204ENST00000606752 RPL7AP62424 266 aaKnown RBP22.81■■□□□ 1.24
USP6NL-204ENST00000606752 FAAP100Q0VG06 881 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 DCAF12L1Q5VU92 463 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 DCUN1D2Q6PH85 259 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 TTC30AQ86WT1 665 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 XYLT1Q86Y38 959 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 CPNE8Q86YQ8 564 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 ARMC5Q96C12 935 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.81■■□□□ 1.24
USP6NL-204ENST00000606752 ELAC1Q9H777 363 aaKnown RBP22.81■■□□□ 1.24
USP6NL-204ENST00000606752 TJP2Q9UDY2 1190 aa22.81■■□□□ 1.24
USP6NL-204ENST00000606752 TTC7AQ9ULT0 858 aaPredicted RBP22.81■■□□□ 1.24
USP6NL-204ENST00000606752 SIGLEC16A6NMB1 481 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 PARNO95453 639 aaKnown RBP22.8■■□□□ 1.24
USP6NL-204ENST00000606752 ERBB2P04626 1255 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 HSPA8P11142 646 aaKnown RBP22.8■■□□□ 1.24
USP6NL-204ENST00000606752 TLE2Q04725 743 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 C2orf54Q08AI8 447 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 PKN2Q16513 984 aaKnown RBP22.8■■□□□ 1.24
USP6NL-204ENST00000606752 TIGD5Q53EQ6 642 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 NOMO2Q5JPE7 1267 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 CLLU1OSQ5K130 101 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms