RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, human

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL3-204	ENST00000606347	AGAP1	Q9UPQ3	857 aa		4.24	□□□□□ -1.73
UCHL3-204	ENST00000606347		A0A0B4J269	797 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	KLHL33	A6NCF5	533 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	LRRC14B	A6NHZ5	514 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	URI1	O94763	535 aa	Predicted RBP	4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	TTLL1	O95922	423 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	ANXA1	P04083	346 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	ALPL	P05186	524 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	JUP	P14923	745 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	THBS3	P49746	956 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	KIF23	Q02241	960 aa	Predicted RBP	4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	TUBB3	Q13509	450 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	MTMR1	Q13613	665 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	KHDC1	Q4VXA5	237 aa	Known RBP	4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	CCDC93	Q567U6	631 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	SYDE2	Q5VT97	1194 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	TAF2	Q6P1X5	1199 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	SLC30A10	Q6XR72	485 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	PDSS2	Q86YH6	399 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	FAM109A	Q8N4B1	249 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	NRAC	Q8N912	160 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	SCAMP4	Q969E2	229 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	OSBPL9	Q96SU4	736 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	SMO	Q99835	787 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	MCM8	Q9UJA3	840 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	TRHDE	Q9UKU6	1024 aa		4.23	□□□□□ -1.73
UCHL3-204	ENST00000606347	SPATA31A3	Q5VYP0	1347 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	TCF20	Q9UGU0	1960 aa	Known RBP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	SMIM35	A0A1B0GVV1	85 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	TISP43	B9A030	160 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	POLRMT	O00411	1230 aa	Known RBP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	GABRD	O14764	452 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	XPOT	O43592	962 aa	Known RBP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	NHLRC4	P0CG21	123 aa	Predicted RBP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	MYBL2	P10244	700 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	NR2F6	P10588	404 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	NDUFV1	P49821	464 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	FXR1	P51114	621 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	PSMC1	P62191	440 aa	Known RBP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	KRT85	P78386	507 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	TCF15	Q12870	199 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	ODF1	Q14990	250 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	PTPRO	Q16827	1216 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	SLC4A10	Q6U841	1118 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	NANOGP1	Q8N7R0	232 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	PSD4	Q8NDX1	1056 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	C1orf43	Q9BWL3	253 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	GPR35	Q9HC97	309 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	SIDT1	Q9NXL6	827 aa	Known RBP	4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	SH3BP4	Q9P0V3	963 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	ATP8A1	Q9Y2Q0	1164 aa		4.22	□□□□□ -1.73
UCHL3-204	ENST00000606347	ZNF785	A8K8V0	405 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347		F5H697	171 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	SMIM22	K7EJ46	135 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	GJB1	P08034	283 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	CHRM3	P20309	590 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	CDKN1C	P49918	316 aa	Predicted RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	CCT8	P50990	548 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	NANOS2	P60321	138 aa	Known RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	BOP1	Q14137	746 aa	Known RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	ERV3-1	Q14264	604 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	HABP2	Q14520	560 aa	Predicted RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	SEMA3A	Q14563	771 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	RNF187	Q5TA31	235 aa	Predicted RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	VPS53	Q5VIR6	699 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	PRAMEF17	Q5VTA0	474 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	FAM90A1	Q86YD7	464 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	FKBP10	Q96AY3	582 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	REPS1	Q96D71	796 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	WBP1	Q96G27	269 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	CTAGE1	Q96RT6	745 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	ALG8	Q9BVK2	526 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	ACTRT3	Q9BYD9	372 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	BRD9	Q9H8M2	597 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	SERHL	Q9NQF3	203 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	SERTAD4	Q9NUC0	356 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	RLIM	Q9NVW2	624 aa		4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	CFAP20	Q9Y6A4	193 aa	Known RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.21	□□□□□ -1.74
UCHL3-204	ENST00000606347	hCG_2014768	A0A024R1R8	64 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	ZNF213	O14771	459 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	PDHA1	P08559	390 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	PRDX5	P30044	214 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	CYP2C19	P33261	490 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	ZNF135	P52742	658 aa	Predicted RBP	4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	TRIP6	Q15654	476 aa	Known RBP	4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	RBM20	Q5T481	1227 aa	Known RBP	4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	PPP1R32	Q7Z5V6	425 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	TPSD1	Q9BZJ3	242 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	EHD3	Q9NZN3	535 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	ICK	Q9UPZ9	632 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	COL4A3BP	Q9Y5P4	624 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	NR2E3	Q9Y5X4	410 aa		4.2	□□□□□ -1.74
UCHL3-204	ENST00000606347	SHTN1	A0MZ66	631 aa		4.19	□□□□□ -1.74
UCHL3-204	ENST00000606347	FAM90A10P	A6NDY2	464 aa		4.19	□□□□□ -1.74
UCHL3-204	ENST00000606347	KIF20A	O95235	890 aa		4.19	□□□□□ -1.74
UCHL3-204	ENST00000606347	EBLN1	P0CF75	366 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms