RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PRCPP42785 496 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 MAGEA11P43364 429 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 CASP4P49662 377 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 CLCN5P51795 746 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 FKBP3Q00688 224 aaKnown RBP12.35□□□□□ -0.43
CCDC12-209ENST00000604164 ZACNQ401N2 412 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 TDRD10Q5VZ19 366 aaKnown RBP12.35□□□□□ -0.43
CCDC12-209ENST00000604164 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 TTC9BQ8N6N2 239 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 FGF14Q92915 247 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 SMARCD2Q92925 531 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 FAM84AQ96KN4 292 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 TNIP3Q96KP6 325 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 PI4K2AQ9BTU6 479 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 XYLT2Q9H1B5 865 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 IRF2BPLQ9H1B7 796 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 DNAJC25Q9H1X3 360 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 CRISPLD1Q9H336 500 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
CCDC12-209ENST00000604164 NXF1Q9UBU9 619 aaKnown RBP12.35□□□□□ -0.43
CCDC12-209ENST00000604164 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 ATP8B3O60423 1300 aa12.35□□□□□ -0.43
CCDC12-209ENST00000604164 A0A1W2PRU2 124 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 STK25O00506 426 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 SLC16A3O15427 465 aaKnown RBP12.34□□□□□ -0.43
CCDC12-209ENST00000604164 AKAP3O75969 853 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 CFHP08603 1231 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC12-209ENST00000604164 ANXA13P27216 316 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 TEAD2Q15562 447 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
CCDC12-209ENST00000604164 SV2AQ7L0J3 742 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 OSTM1Q86WC4 334 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 TMC8Q8IU68 726 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 SIX5Q8N196 739 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 SHKBP1Q8TBC3 707 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 PLEKHO2Q8TD55 490 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 KBTBD7Q8WVZ9 684 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 TCEAL4Q96EI5 215 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 DHTKD1Q96HY7 919 aaPredicted RBP12.34□□□□□ -0.43
CCDC12-209ENST00000604164 ASB16Q96NS5 453 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 LRRC3Q9BY71 257 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
CCDC12-209ENST00000604164 ATXN3LQ9H3M9 355 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 TRPV4Q9HBA0 871 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 DOCK8Q8NF50 2099 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 MYO10Q9HD67 2058 aa12.34□□□□□ -0.43
CCDC12-209ENST00000604164 TECTAO75443 2155 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 BICDL2A1A5D9 508 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 A8MXQ7 604 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 DPYSL4O14531 572 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TRIM66O15016 1216 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 NARSO43776 548 aaKnown RBP12.33□□□□□ -0.44
CCDC12-209ENST00000604164 SOAT2O75908 522 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 ATF6P18850 670 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 LMO2P25791 158 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 GABRR2P28476 465 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 WEE1P30291 646 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 AVPR2P30518 371 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 CCR2P41597 374 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 DLG4P78352 724 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 CYP27A1Q02318 531 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 FAM78AQ5JUQ0 283 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 KRT39Q6A163 491 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 SMYD4Q8IYR2 804 aaPredicted RBP12.33□□□□□ -0.44
CCDC12-209ENST00000604164 ADSSL1Q8N142 457 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TTC39CQ8N584 583 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 ZSCAN18Q8TBC5 510 aaPredicted RBP12.33□□□□□ -0.44
CCDC12-209ENST00000604164 MYCBPAPQ8TBZ2 947 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 GIPC2Q8TF65 315 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TRMT2BQ96GJ1 504 aaKnown RBP12.33□□□□□ -0.44
CCDC12-209ENST00000604164 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 LPIN3Q9BQK8 851 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TRMT61BQ9BVS5 477 aaKnown RBP12.33□□□□□ -0.44
CCDC12-209ENST00000604164 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 SMOC2Q9H3U7 446 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TASP1Q9H6P5 420 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TMEM8AQ9HCN3 771 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 ARHGEF3Q9NR81 526 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 TMLHEQ9NVH6 421 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 OBP2AQ9NY56 170 aa12.33□□□□□ -0.44
CCDC12-209ENST00000604164 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 MOSPD3O75425 235 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 HLA-DRAP01903 254 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 PSMC3P17980 439 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 PTPN1P18031 435 aaKnown RBP12.32□□□□□ -0.44
CCDC12-209ENST00000604164 CCNE1P24864 410 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 CYP2F1P24903 491 aa12.32□□□□□ -0.44
CCDC12-209ENST00000604164 GRIK1P39086 918 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms