RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 RGS7P49802 495 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GALNTL6Q49A17 601 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CIAPIN1Q6FI81 312 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GOLPH3Q9H4A6 298 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CAMSAP1Q5T5Y3 1602 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 ZNF335Q9H4Z2 1342 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 TRIM49D1C9J1S8 452 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GRK2P25098 689 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CACHD1Q5VU97 1274 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PTRHD1Q6GMV3 140 aaKnown RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SERPINB12Q96P63 405 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 HSMCR30P0CW71 290 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CPB1P15086 417 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 DNAJC3Q13217 504 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SGMS1Q86VZ5 419 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PDS5AQ29RF7 1337 aaKnown RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 HEATR9A2RTY3 570 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 RBP5P82980 135 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CLEC16AQ2KHT3 1053 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 WRNIP1Q96S55 665 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 ARHGEF3Q9NR81 526 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 CFAP99D6REC4 459 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 ASZ1Q8WWH4 475 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 IL18RAPO95256 599 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GYPCP04921 128 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PRKCBP05771 671 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 FAM83EQ2M2I3 478 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PLEKHA7Q6IQ23 1121 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 KLF6Q99612 283 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SPASTQ9UBP0 616 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 DISP1Q96F81 1524 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 ZCCHC18P0CG32 403 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PRIM2P49643 509 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 OTUD4Q01804 1114 aaKnown RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SLC29A2Q14542 456 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 ARID3BQ8IVW6 561 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 ST13P5Q8NFI4 369 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-217ENST00000602723 FAR2Q96K12 515 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SPATA16Q9BXB7 569 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PALLDQ8WX93 1383 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 PEX5P50542 639 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 KDM7AQ6ZMT4 941 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 SHCBP1LQ9BZQ2 653 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 VCPKMTQ9H867 229 aa9.99□□□□□ -0.81
CSMD1-217ENST00000602723 GUCY1A2P33402 732 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 NUP62P37198 522 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 NCKAP1LP55160 1127 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 ADRM1Q16186 407 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 EDRF1Q3B7T1 1238 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 CCDC149Q6ZUS6 474 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TLK2Q86UE8 772 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 SRP68Q9UHB9 627 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 NEO1Q92859 1461 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 STK25O00506 426 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 PSTPIP1O43586 416 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 ST13P50502 369 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 GPSM2P81274 684 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 STX5Q13190 355 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 STILQ15468 1287 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 OR8H2Q8N162 312 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 MOV10L1Q9BXT6 1211 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 LOC100653049A0A140TA62 436 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 KRT34O76011 436 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 KLK7P49862 253 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 HEATR4Q86WZ0 1026 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 ADSSL1Q8N142 457 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 RBBP8NLQ8NC74 664 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TFB1MQ8WVM0 346 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 PIGBQ92521 554 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 FAM111AQ96PZ2 611 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 REEP2Q9BRK0 252 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 LINC00854A0A1B0GVQ3 168 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TSC22D2O75157 780 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 EIF2S1P05198 315 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 FNTAP49354 379 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 SGSM1Q2NKQ1 1148 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 SLC25A41Q8N5S1 370 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 USP33Q8TEY7 942 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 THUMPD3Q9BV44 507 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TPST1O60507 370 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 MMRN1Q13201 1228 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 MMGT1Q8N4V1 131 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 SMARCAD1Q9H4L7 1026 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 CATSPERBQ9H7T0 1116 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 ZCCHC11Q5TAX3 1644 aaKnown RBP9.98□□□□□ -0.81
CSMD1-217ENST00000602723 TRIM24O15164 1050 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 MTSS1O43312 755 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 ECE2O60344 883 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 EPHA10Q5JZY3 1008 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 CLEC4GQ6UXB4 293 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 CHSY1Q86X52 802 aa9.98□□□□□ -0.81
CSMD1-217ENST00000602723 HS6ST3Q8IZP7 471 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms