RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 MYL6P60660 151 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 TWF1Q12792 350 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 DUSP4Q13115 394 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 BIRC3Q13489 604 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 NCOA4Q13772 614 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 NFE2Q16621 373 aaPredicted RBP17.33■□□□□ 0.36
LSM4-206ENST00000600289 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
LSM4-206ENST00000600289 INTS6LQ5JSJ4 861 aaKnown RBP17.33■□□□□ 0.36
LSM4-206ENST00000600289 ANKRD40Q6AI12 368 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 SV2AQ7L0J3 742 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 LRRTM3Q86VH5 581 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 OSTM1Q86WC4 334 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 PGLYRP2Q96PD5 576 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 ABCB6Q9NP58 842 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 LMBRD1Q9NUN5 540 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 KIAA1468Q9P260 1216 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 ASB3Q9Y575 518 aa17.33■□□□□ 0.36
LSM4-206ENST00000600289 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 EPB41P11171 864 aaKnown RBP17.32■□□□□ 0.36
LSM4-206ENST00000600289 SP100P23497 879 aaPredicted RBP17.32■□□□□ 0.36
LSM4-206ENST00000600289 TUFMP49411 452 aaKnown RBP17.32■□□□□ 0.36
LSM4-206ENST00000600289 TNNC1P63316 161 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 ZNF699Q32M78 642 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 WDR72Q3MJ13 1102 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 ELMOD1Q8N336 334 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 ATAD1Q8NBU5 361 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 NXPE3Q969Y0 559 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 MYADMQ96S97 322 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 CLSTN2Q9H4D0 955 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 HCFC1R1Q9NWW0 138 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 CEP72Q9P209 647 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 IGSF9Q9P2J2 1179 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 CDH9Q9ULB4 789 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 POLIQ9UNA4 740 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 SORCS3Q9UPU3 1222 aa17.32■□□□□ 0.36
LSM4-206ENST00000600289 PATJQ8NI35 1801 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 BICDL2A1A5D9 508 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 STX10O60499 249 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 ASS1P00966 412 aaKnown RBP17.31■□□□□ 0.36
LSM4-206ENST00000600289 RHOP08100 348 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 LAMP2P13473 410 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 GBP2P32456 591 aaPredicted RBP17.31■□□□□ 0.36
LSM4-206ENST00000600289 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 EPHB3P54753 998 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 NTHL1P78549 312 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 PPP3CAQ08209 521 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 SGSM1Q2NKQ1 1148 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 CFAP221Q4G0U5 840 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 PRSS36Q5K4E3 855 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 TTI2Q6NXR4 508 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 GET4Q7L5D6 327 aaPredicted RBP17.31■□□□□ 0.36
LSM4-206ENST00000600289 FUBP3Q96I24 572 aaKnown RBP eCLIP17.31■□□□□ 0.36
LSM4-206ENST00000600289 ZNF512Q96ME7 567 aaPredicted RBP17.31■□□□□ 0.36
LSM4-206ENST00000600289 CEP63Q96MT8 703 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 DNAJC25Q9H1X3 360 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 TMEM8AQ9HCN3 771 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 CDH7Q9ULB5 785 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 FANCMQ8IYD8 2048 aa17.31■□□□□ 0.36
LSM4-206ENST00000600289 USP24Q9UPU5 2620 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 ANHXE9PGG2 379 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 ZNF197O14709 1029 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 TRIM49P0CI25 452 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 TRIM49CP0CI26 452 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 HAPLN1P10915 354 aaPredicted RBP17.3■□□□□ 0.36
LSM4-206ENST00000600289 MAPRE1Q15691 268 aaKnown RBP17.3■□□□□ 0.36
LSM4-206ENST00000600289 ZNF667Q5HYK9 610 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 ISM2Q6H9L7 571 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 UBALD2Q8IYN6 164 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 PSMG2Q969U7 264 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 FAXDC2Q96IV6 333 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 MMS19Q96T76 1030 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 SYT15Q9BQS2 421 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 LRRC3Q9BY71 257 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 TMLHEQ9NVH6 421 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 SLC27A5Q9Y2P5 690 aa17.3■□□□□ 0.36
LSM4-206ENST00000600289 ZNF638Q14966 1978 aaKnown RBP17.29■□□□□ 0.36
LSM4-206ENST00000600289 BIN1O00499 593 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 HLA-DRAP01903 254 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 P4HA1P13674 534 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 ATF6P18850 670 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 ACAT1P24752 427 aaKnown RBP17.29■□□□□ 0.36
LSM4-206ENST00000600289 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 CAMK4Q16566 473 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 SLC5A9Q2M3M2 681 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 KRT39Q6A163 491 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 FILIP1Q7Z7B0 1213 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 ITIH5Q86UX2 942 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 NPAS3Q8IXF0 933 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 TTC9BQ8N6N2 239 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 ITFG1Q8TB96 612 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 NELFBQ8WX92 580 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 FGF13Q92913 245 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 DUSP9Q99956 384 aaKnown RBP17.29■□□□□ 0.36
LSM4-206ENST00000600289 CORO1BQ9BR76 489 aa17.29■□□□□ 0.36
LSM4-206ENST00000600289 MRPL45Q9BRJ2 306 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms