RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TASP1Q9H6P5 420 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 ABCB6Q9NP58 842 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 ZMYM5Q9UJ78 669 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 HPSEQ9Y251 543 aa24.7■■□□□ 1.54
SSBP4-205ENST00000598159 MTF2Q9Y483 593 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-205ENST00000598159 GFRA3O60609 400 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 DLATP10515 647 aaKnown RBP24.69■■□□□ 1.54
SSBP4-205ENST00000598159 GLULP15104 373 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 CD72P21854 359 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 YAF2Q8IY57 180 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 GCNAQ96QF7 691 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 PI4K2AQ9BTU6 479 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 SCAND2PQ9GZW5 306 aaPredicted RBP24.69■■□□□ 1.54
SSBP4-205ENST00000598159 IL21Q9HBE4 155 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 EXOC1Q9NV70 894 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 OBP2AQ9NY56 170 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 GTF3C4Q9UKN8 822 aa24.69■■□□□ 1.54
SSBP4-205ENST00000598159 DPYSL4O14531 572 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 LRRN2O75325 713 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CST3P01034 146 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-205ENST00000598159 FAM163BP0C2L3 166 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CSH1P0DML2 217 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CSH2P0DML3 217 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 ACAT1P24752 427 aaKnown RBP24.68■■□□□ 1.54
SSBP4-205ENST00000598159 MLLT6P55198 1093 aaPredicted RBP24.68■■□□□ 1.54
SSBP4-205ENST00000598159 RPL10AP62906 217 aaKnown RBP24.68■■□□□ 1.54
SSBP4-205ENST00000598159 STK4Q13043 487 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 KMT5BQ4FZB7 885 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 STXBP5Q5T5C0 1151 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 OSTM1Q86WC4 334 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CLDN23Q96B33 292 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CCDC127Q96BQ5 260 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 PKMYT1Q99640 499 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CGRRF1Q99675 332 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 MKNK1Q9BUB5 465 aa24.68■■□□□ 1.54
SSBP4-205ENST00000598159 CHADO15335 359 aa24.67■■□□□ 1.54
SSBP4-205ENST00000598159 EXOC3O60645 756 aa24.67■■□□□ 1.54
SSBP4-205ENST00000598159 SYKP43405 635 aa24.67■■□□□ 1.54
SSBP4-205ENST00000598159 FAM171BQ6P995 826 aa24.67■■□□□ 1.54
SSBP4-205ENST00000598159 FRMD5Q7Z6J6 570 aa24.67■■□□□ 1.54
SSBP4-205ENST00000598159 CDH9Q9ULB4 789 aa24.67■■□□□ 1.54
SSBP4-205ENST00000598159 FAM237AA0A1B0GTK4 181 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 SOBPA7XYQ1 873 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 HMGA1P17096 107 aaKnown RBP24.66■■□□□ 1.54
SSBP4-205ENST00000598159 CYP2F1P24903 491 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 FCHO2Q0JRZ9 810 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 CFAP221Q4G0U5 840 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 SPATA2LQ8IUW3 424 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-205ENST00000598159 TMEM174Q8WUU8 243 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 NKD2Q969F2 451 aaPredicted RBP24.66■■□□□ 1.54
SSBP4-205ENST00000598159 FUBP3Q96I24 572 aaKnown RBP eCLIP24.66■■□□□ 1.54
SSBP4-205ENST00000598159 MMS19Q96T76 1030 aa24.66■■□□□ 1.54
SSBP4-205ENST00000598159 CACNA1IQ9P0X4 2223 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 F11P03951 625 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 WARSP23381 471 aaKnown RBP24.65■■□□□ 1.54
SSBP4-205ENST00000598159 TARSP26639 723 aaKnown RBP24.65■■□□□ 1.54
SSBP4-205ENST00000598159 RPS9P46781 194 aaKnown RBP24.65■■□□□ 1.54
SSBP4-205ENST00000598159 MAPRE1Q15691 268 aaKnown RBP24.65■■□□□ 1.54
SSBP4-205ENST00000598159 GPIHBP1Q8IV16 184 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 KIAA0895Q8NCT3 520 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 CSGALNACT1Q8TDX6 532 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 KBTBD7Q8WVZ9 684 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 ZNF516Q92618 1163 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 RSPRY1Q96DX4 576 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 SLC46A2Q9BY10 475 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 SEMA4AQ9H3S1 761 aa24.65■■□□□ 1.54
SSBP4-205ENST00000598159 UXTQ9UBK9 157 aaPredicted RBP24.65■■□□□ 1.54
SSBP4-205ENST00000598159 NCANO14594 1321 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 A0A1W2PQ27 194 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 A0A1W2PQ64 194 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 A0A1W2PQD8 194 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 MYBPHLA2RUH7 354 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 SHISA7A6NL88 538 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 ARNTLO00327 626 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 LMO2P25791 158 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 DDX6P26196 483 aaKnown RBP eCLIP24.64■■□□□ 1.541e-6■■■■□ 24.4
SSBP4-205ENST00000598159 AP3M2P53677 418 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 NLRP12P59046 1061 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 CYP4F8P98187 520 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 TRPC3Q13507 836 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 DDR2Q16832 855 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 ARHGAP29Q52LW3 1261 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 C4orf50Q6ZRC1 276 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 SLC9A9Q8IVB4 645 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 FAM3CQ92520 227 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 CCDC47Q96A33 483 aaKnown RBP24.64■■□□□ 1.54
SSBP4-205ENST00000598159 CHAMP1Q96JM3 812 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 DMAC2Q9NW81 257 aa24.64■■□□□ 1.54
SSBP4-205ENST00000598159 SPATA6Q9NWH7 488 aaPredicted RBP24.64■■□□□ 1.54
SSBP4-205ENST00000598159 MAGEC2Q9UBF1 373 aaPredicted RBP24.64■■□□□ 1.54
SSBP4-205ENST00000598159 NUP210Q8TEM1 1887 aaPredicted RBP24.64■■□□□ 1.53
SSBP4-205ENST00000598159 DENND4CQ5VZ89 1909 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 COL4A3Q01955 1670 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 PDXKO00764 312 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 TACC1O75410 805 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 STAU1O95793 577 aaKnown RBP24.63■■□□□ 1.53
SSBP4-205ENST00000598159 RPN1P04843 607 aaKnown RBP24.63■■□□□ 1.53
SSBP4-205ENST00000598159 SP9P0CG40 484 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 ATICP31939 592 aa24.63■■□□□ 1.53
SSBP4-205ENST00000598159 GNL1P36915 607 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms