RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 AGAP1Q9UPQ3 857 aa13.04□□□□□ -0.32
SOX2-OT-228ENST00000597828 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-228ENST00000597828 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-228ENST00000597828 PI4KAP42356 2102 aa13.04□□□□□ -0.32
SOX2-OT-228ENST00000597828 NCOR2Q9Y618 2525 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 OTOL1A6NHN0 477 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 HRO43593 1189 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 IL18RAPO95256 599 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 FGF19O95750 216 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 F11P03951 625 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 IDEP14735 1019 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 SYT1P21579 422 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 ABCD1P33897 745 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 MLLT6P55198 1093 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 NLRP12P59046 1061 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 BFSP1Q12934 665 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 CCINQ13939 588 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 SV2BQ7L1I2 683 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 RALGPS2Q86X27 583 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 CMTM8Q8IZV2 173 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 CXorf38Q8TB03 319 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 HPS3Q969F9 1004 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 PCDHB5Q9Y5E4 795 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
SOX2-OT-228ENST00000597828 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 ARSAP15289 507 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 GAP43P17677 238 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 PAX3P23760 479 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 CYP2F1P24903 491 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 STAT6P42226 847 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 NRLP54845 237 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 TSPY1Q01534 308 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 SIM2Q14190 667 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 PPP2R5DQ14738 602 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 TAF12Q16514 161 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 DDR2Q16832 855 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 TXNDC8Q6A555 127 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 LAIR1Q6GTX8 287 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 NT5DC4Q86YG4 428 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 PDILTQ8N807 584 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 C2orf15Q8WU43 125 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 PKMYT1Q99640 499 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 EBF3Q9H4W6 596 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 GKN1Q9NS71 199 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 POLR3BQ9NW08 1133 aaPredicted RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 DDX43Q9NXZ2 648 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 SEL1LQ9UBV2 794 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 SIX4Q9UIU6 781 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 CDV3Q9UKY7 258 aaKnown RBP13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
SOX2-OT-228ENST00000597828 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 DCDC2BA2VCK2 349 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 EXTL3O43909 919 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 KRT19P08727 400 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 TXLNAP40222 546 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 PXNP49023 591 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 LMNB2Q03252 620 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 POSTNQ15063 836 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 ITPRIPL2Q3MIP1 535 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 INTS6LQ5JSJ4 861 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 DCP1BQ8IZD4 617 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 CSGALNACT2Q8N6G5 542 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 SLC22A12Q96S37 553 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 FAM83CQ9BQN1 747 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 OLFML3Q9NRN5 406 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 PANK4Q9NVE7 773 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 GTF3C4Q9UKN8 822 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 EXOC7Q9UPT5 735 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 SNX9Q9Y5X1 595 aa13.01□□□□□ -0.33
SOX2-OT-228ENST00000597828 ATP2C2O75185 946 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
SOX2-OT-228ENST00000597828 EGFP01133 1207 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 GARTP22102 1010 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 WEE1P30291 646 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 AVPR1AP37288 418 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 PNPLA4P41247 253 aa13□□□□□ -0.33
SOX2-OT-228ENST00000597828 PSMC1P62191 440 aaKnown RBP13□□□□□ -0.33
SOX2-OT-228ENST00000597828 PLCB2Q00722 1185 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms