RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ACAT1P24752 427 aaKnown RBP16.3■□□□□ 0.2
TGFB1-202ENST00000597453 CDC25CP30307 473 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 HOXD13P35453 343 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 GAS6Q14393 721 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 CCDC142Q17RM4 750 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 WDR44Q5JSH3 913 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 LMBRD2Q68DH5 695 aaPredicted RBP16.3■□□□□ 0.2
TGFB1-202ENST00000597453 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 OSTM1Q86WC4 334 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 DCP1BQ8IZD4 617 aaKnown RBP16.3■□□□□ 0.2
TGFB1-202ENST00000597453 GPD1LQ8N335 351 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 LRRC52Q8N7C0 313 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
TGFB1-202ENST00000597453 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 PI4K2AQ9BTU6 479 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 SLC46A2Q9BY10 475 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 KBTBD4Q9NVX7 518 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 GTSE1Q9NYZ3 720 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 PCDHB5Q9Y5E4 795 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 DPYSL4O14531 572 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 HCRTO43612 131 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 KRT19P08727 400 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 WEE1P30291 646 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 KPNA1P52294 538 aaPredicted RBP16.29■□□□□ 0.2
TGFB1-202ENST00000597453 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
TGFB1-202ENST00000597453 TSPY1Q01534 308 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 TNK2Q07912 1038 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 CSGALNACT2Q8N6G5 542 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 IQUBQ8NA54 791 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 DHX58Q96C10 678 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 TRIM9Q9C026 710 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 RBM12Q9NTZ6 932 aaKnown RBP16.29■□□□□ 0.2
TGFB1-202ENST00000597453 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
TGFB1-202ENST00000597453 OBP2AQ9NY56 170 aa16.29■□□□□ 0.2
TGFB1-202ENST00000597453 GREB1Q4ZG55 1949 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 ANAPC1Q9H1A4 1944 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 MYBPHLA2RUH7 354 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 HUS1O60921 280 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
TGFB1-202ENST00000597453 F11P03951 625 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 TMEM191BP0C7N4 346 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 CTHP32929 405 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 TAF12Q16514 161 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 DDR2Q16832 855 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 INTS6LQ5JSJ4 861 aaKnown RBP16.28■□□□□ 0.2
TGFB1-202ENST00000597453 MAMSTRQ6ZN01 415 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 BPIFB1Q8TDL5 484 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 RMDN1Q96DB5 314 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 MSANTD3Q96H12 275 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 ACBD6Q9BR61 282 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 IER2Q9BTL4 223 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
TGFB1-202ENST00000597453 MAGEF1Q9HAY2 307 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 GDAP2Q9NXN4 497 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
TGFB1-202ENST00000597453 SMG5Q9UPR3 1016 aaKnown RBP16.28■□□□□ 0.2
TGFB1-202ENST00000597453 SNX9Q9Y5X1 595 aa16.28■□□□□ 0.2
TGFB1-202ENST00000597453 PTPRDP23468 1912 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 CYP2F1P24903 491 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 CCR3P51677 355 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 NLRP12P59046 1061 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 RBP5P82980 135 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 MYL7Q01449 175 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 SATB1Q01826 763 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 NFE2Q16621 373 aaPredicted RBP16.27■□□□□ 0.2
TGFB1-202ENST00000597453 SOWAHAQ2M3V2 549 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 Q6ZS52 159 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 EPM2AIP1Q7L775 607 aaPredicted RBP16.27■□□□□ 0.2
TGFB1-202ENST00000597453 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 CMTM8Q8IZV2 173 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 TMEM86AQ8N2M4 240 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 CELF5Q8N6W0 485 aaKnown RBP16.27■□□□□ 0.2
TGFB1-202ENST00000597453 RIN3Q8TB24 985 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 LRRC27Q9C0I9 530 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 INTS13Q9NVM9 706 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 HSPBP1Q9NZL4 362 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 GTF3C4Q9UKN8 822 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
TGFB1-202ENST00000597453 CCL26Q9Y258 94 aa16.27■□□□□ 0.2
TGFB1-202ENST00000597453 GABRDO14764 452 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 POLR2DO15514 142 aaKnown RBP16.26■□□□□ 0.19
TGFB1-202ENST00000597453 TADA3O75528 432 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 CMA1P23946 247 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 ASIC1P78348 528 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 TXNDC8Q6A555 127 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 C1orf228Q6PIY5 440 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 STXBP4Q6ZWJ1 553 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms