RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 WDR5BQ86VZ2 330 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 NT5DC4Q86YG4 428 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 FAM160A2Q8N612 972 aaPredicted RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 TTC16Q8NEE8 873 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 MRPS31Q92665 395 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 HVCN1Q96D96 273 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 EPSTI1Q96J88 318 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 IKZF4Q9H2S9 585 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 ST6GALNAC4Q9H4F1 302 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 EBF3Q9H4W6 596 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 MRPL44Q9H9J2 332 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 TBC1D7Q9P0N9 293 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 AGAP1Q9UPQ3 857 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 SLC8A2Q9UPR5 921 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 CEP192Q8TEP8 1941 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 NCOR2Q9Y618 2525 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 PI4KAP42356 2102 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 WDR87Q6ZQQ6 2873 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 VPS37CA5D8V6 355 aaPredicted RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 EXTL3O43909 919 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 GDF9O60383 454 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 HUS1O60921 280 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 ATG13O75143 517 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 LDHAP00338 332 aaKnown RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 CSH1P0DML2 217 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 CSH2P0DML3 217 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 CCDC192P0DO97 292 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 HMGA1P17096 107 aaKnown RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 POLR2BP30876 1174 aaKnown RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 PNPLA4P41247 253 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 PXNP49023 591 aaPredicted RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 NLRP12P59046 1061 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 MYL7Q01449 175 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 NFE2Q16621 373 aaPredicted RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 PPM1JQ5JR12 505 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 SDHAF4Q5VUM1 108 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 RRAGBQ5VZM2 374 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 TXNDC8Q6A555 127 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 USP49Q70CQ1 688 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 STKLD1Q8NE28 680 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 USP13Q92995 863 aaPredicted RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 ACCSQ96QU6 501 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 FAM83CQ9BQN1 747 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 FAM213AQ9BRX8 229 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 ARRDC1-AS1Q9H2J1 176 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 KIF9Q9HAQ2 790 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 HPS4Q9NQG7 708 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 TDP1Q9NUW8 608 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 TMLHEQ9NVH6 421 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 DDX43Q9NXZ2 648 aaKnown RBP11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
CHMP2A-202ENST00000596708 FOXD2O60548 495 aaPredicted RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 RPP40O75818 363 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 GCNT3O95395 438 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 ITGB3P05106 788 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 ADRB1P08588 477 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 KRT19P08727 400 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 GAP43P17677 238 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 ACAT1P24752 427 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 ADSSP30520 456 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 HOXA6P31267 233 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 TXLNAP40222 546 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 RPL10AP62906 217 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 KCNA1Q09470 495 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 DDR2Q16832 855 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 AASDHQ4L235 1098 aaPredicted RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 TMEM196Q5HYL7 178 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 IL31Q6EBC2 164 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 FSTL4Q6MZW2 842 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 PKN3Q6P5Z2 889 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 TMEM150AQ86TG1 271 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 MON1AQ86VX9 555 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 PDCL2Q8N4E4 241 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 CSGALNACT2Q8N6G5 542 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 C12orf50Q8NA57 414 aaPredicted RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 ZSWIM2Q8NEG5 633 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 ACBD6Q9BR61 282 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 UXTQ9UBK9 157 aaPredicted RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 STK17AQ9UEE5 414 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 CLIC4Q9Y696 253 aa11.36□□□□□ -0.59
CHMP2A-202ENST00000596708 GON4LQ3T8J9 2241 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 GOLGA8IPA6NC78 632 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 OTOL1A6NHN0 477 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 MYMKA6NI61 221 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 GOLGA8JA6NMD2 632 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 SOBPA7XYQ1 873 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 RNF40O75150 1001 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 PPP1R37O75864 691 aa11.35□□□□□ -0.59
CHMP2A-202ENST00000596708 EGFP01133 1207 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms