RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TCRBV7S2A1N4TA0A589 114 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ADCY6O43306 1168 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 MYBL1P10243 752 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 DR1Q01658 176 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 FAM110CQ1W6H9 321 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ANKRD20A2Q5SQ80 823 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ANKRD20A1Q5TYW2 823 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 ANKRD20A3Q5VUR7 823 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 HOOK3Q86VS8 718 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 OR6J1Q8NGC5 347 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 C18orf8Q96DM3 657 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 TRIM11Q96F44 468 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 NEUROG2Q9H2A3 272 aa18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 UTP11Q9Y3A2 253 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-205ENST00000594973 B4GALT4O60513 344 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 WFS1O76024 890 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 MMP3P08254 477 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 NFICP08651 508 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 STAG3L1P0CL83 205 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 ATP2A2P16615 1042 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 NCALDP61601 193 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 POU5F1Q01860 360 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 DUSP28Q4G0W2 176 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 CMPK2Q5EBM0 449 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 PRAMEF19Q5SWL8 479 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 TMC3Q7Z5M5 1100 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 ZDHHC14Q8IZN3 488 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 NFKBIZQ9BYH8 718 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 AVENQ9NQS1 362 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
SHKBP1-205ENST00000594973 DCDC2CA8MYV0 355 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 GJB6O95452 261 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 ABL2P42684 1182 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 ZNF132P52740 706 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 GRIK4Q16099 956 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 AMHR2Q16671 573 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 LIN9Q5TKA1 542 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 TRIM72Q6ZMU5 477 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 LINC01465Q8N7H1 131 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 UBR7Q8N806 425 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 ATXN2LQ8WWM7 1075 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 OSBPL1AQ9BXW6 950 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 XYLT2Q9H1B5 865 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 ABHD16BQ9H3Z7 469 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 PDZD7Q9H5P4 517 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 POLIQ9UNA4 740 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 LACTBL1A8MY62 500 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 RARAP10276 462 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 ARF4P18085 180 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 CTNNA2P26232 953 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 ASPAP45381 313 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 RAP1GAPP47736 663 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 GALNTL6Q49A17 601 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 PRELID2Q8N945 189 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 IRAK4Q9NWZ3 460 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 AGAP1Q9UPQ3 857 aa18.01■□□□□ 0.47
SHKBP1-205ENST00000594973 FGFR4P22455 802 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 MMP13P45452 471 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 TMEM62Q0P6H9 643 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 MAMLD1Q13495 774 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 CLUL1Q15846 466 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 FAM133BQ5BKY9 247 aaKnown RBP18■□□□□ 0.47
SHKBP1-205ENST00000594973 MARCH8Q5T0T0 291 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 GALNT15Q8N3T1 639 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 SEC14L1Q92503 715 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 NAF1Q96HR8 494 aaKnown RBP18■□□□□ 0.47
SHKBP1-205ENST00000594973 SETD4Q9NVD3 440 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 NPTXRO95502 500 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 CHN1P15882 459 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 CTCFP49711 727 aaPredicted RBP18■□□□□ 0.47
SHKBP1-205ENST00000594973 KCNJ2P63252 427 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 SNX1Q13596 522 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 DGKDQ16760 1214 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 WDR72Q3MJ13 1102 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 JADE1Q6IE81 842 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 MDM1Q8TC05 714 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 RAB17Q9H0T7 212 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 ARHGEF3Q9NR81 526 aa18■□□□□ 0.47
SHKBP1-205ENST00000594973 IL18RAPO95256 599 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 VIMP08670 466 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 MRPS35P82673 323 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 LACTBP83111 547 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 ATP11AP98196 1134 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 POU5F1BQ06416 359 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 KIZQ2M2Z5 673 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 CST9Q5W186 159 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 PHF13Q86YI8 300 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 SLC13A5Q86YT5 568 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 C1orf127Q8N9H9 656 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 LENG1Q96BZ8 264 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 PGM2Q96G03 612 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 ECT2Q9H8V3 914 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 FAM114A2Q9NRY5 505 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 SIX4Q9UIU6 781 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 LRRD1A4D1F6 860 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 DYNC1LI2O43237 492 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 PHF2O75151 1096 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 ITGB3P05106 788 aa17.99■□□□□ 0.47
SHKBP1-205ENST00000594973 MCF2P10911 925 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms