RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ZSWIM2Q8NEG5 633 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 FUBP3Q96I24 572 aaKnown RBP eCLIP14.27□□□□□ -0.13
APOC1-209ENST00000592885 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 PANK2Q9BZ23 570 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 MTMR12Q9C0I1 747 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 PDE11AQ9HCR9 933 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 INTS13Q9NVM9 706 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 THG1LQ9NWX6 298 aaKnown RBP14.27□□□□□ -0.13
APOC1-209ENST00000592885 DDX43Q9NXZ2 648 aaKnown RBP14.27□□□□□ -0.13
APOC1-209ENST00000592885 ZNF292O60281 2723 aa14.27□□□□□ -0.13
APOC1-209ENST00000592885 SPTBN4Q9H254 2564 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 GOLGA8IPA6NC78 632 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 GOLGA8JA6NMD2 632 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 GABRDO14764 452 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 PRPF40AO75400 957 aaKnown RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 PAPSS2O95340 614 aaPredicted RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 PRAMEF12O95522 483 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 TNNC2P02585 160 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 KRT19P08727 400 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 CHRNB1P11230 501 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 TDGF1P13385 188 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 CCNE1P24864 410 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 CTHP32929 405 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 ASIC1P78348 528 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 CYP4F8P98187 520 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 CFAP221Q4G0U5 840 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 DGKKQ5KSL6 1271 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 ATL3Q6DD88 541 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 EPM2AIP1Q7L775 607 aaPredicted RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 WDR49Q8IV35 697 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 ADGRF2Q8IZF7 708 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 CMTM8Q8IZV2 173 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 GPR161Q8N6U8 529 aaKnown RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 GIPC2Q8TF65 315 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
APOC1-209ENST00000592885 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 LMAN1LQ9HAT1 526 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 HSPBP1Q9NZL4 362 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 SIX4Q9UIU6 781 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 SNX9Q9Y5X1 595 aa14.26□□□□□ -0.13
APOC1-209ENST00000592885 SLC38A8A6NNN8 435 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 SPECC1L-ADORA2AF8WAN1 911 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 NOL4O94818 638 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 F11P03951 625 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 AVPR1AP37288 418 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 NLRP12P59046 1061 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 DUOXA2Q1HG44 320 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 FAM26FQ5R3K3 315 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 UNC13DQ70J99 1090 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 LIMS2Q7Z4I7 341 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 SYNPOQ8N3V7 929 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 SPEM1Q8N4L4 309 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 ZNF507Q8TCN5 953 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 MRPS31Q92665 395 aaKnown RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 DHX58Q96C10 678 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 MYRFLQ96LU7 910 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 CEP295NLQ96MC4 621 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 C7orf25Q9BPX7 421 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 PI4K2AQ9BTU6 479 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 SLC46A2Q9BY10 475 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 TMLHEQ9NVH6 421 aa14.25□□□□□ -0.13
APOC1-209ENST00000592885 CGNQ9P2M7 1197 aaKnown RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 SMG5Q9UPR3 1016 aaKnown RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 EP300Q09472 2414 aaPredicted RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 ZNF638Q14966 1978 aaKnown RBP14.25□□□□□ -0.13
APOC1-209ENST00000592885 ZSCAN22P10073 491 aaPredicted RBP14.24□□□□□ -0.13
APOC1-209ENST00000592885 MAGEA11P43364 429 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 EHHADHQ08426 723 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
APOC1-209ENST00000592885 ITPRIPL2Q3MIP1 535 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 C4orf50Q6ZRC1 276 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 TMEM150AQ86TG1 271 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 SPATA2LQ8IUW3 424 aaPredicted RBP14.24□□□□□ -0.13
APOC1-209ENST00000592885 HPDLQ96IR7 371 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 LRRC3BQ96PB8 259 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 AGPAT3Q9NRZ7 376 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 NCDNQ9UBB6 729 aa14.24□□□□□ -0.13
APOC1-209ENST00000592885 TFIP11Q9UBB9 837 aaKnown RBP14.24□□□□□ -0.13
APOC1-209ENST00000592885 PTPRDP23468 1912 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 PTPRJQ12913 1337 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 PVALEFA0A1B0GWK0 134 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 F13A1P00488 732 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 HSP90AA1P07900 732 aaKnown RBP14.23□□□□□ -0.13
APOC1-209ENST00000592885 WARSP23381 471 aaKnown RBP14.23□□□□□ -0.13
APOC1-209ENST00000592885 CXCL12P48061 93 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 SNRNP35Q16560 246 aaKnown RBP14.23□□□□□ -0.13
APOC1-209ENST00000592885 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 SOWAHAQ2M3V2 549 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 FAM171BQ6P995 826 aa14.23□□□□□ -0.13
APOC1-209ENST00000592885 TSSK4Q6SA08 328 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms