RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 RTN4Q9NQC3 1192 aaKnown RBP20.41■□□□□ 0.86
DDX39A-214ENST00000590556 TMLHEQ9NVH6 421 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 HMGXB4Q9UGU5 601 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 TBX10O75333 385 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 SEC24AO95486 1093 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 VNN2O95498 520 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 LTBRP36941 435 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 MFAP3P55082 362 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 DLX2Q07687 328 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-214ENST00000590556 DUSP4Q13115 394 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 ORC1Q13415 861 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 SYCP1Q15431 976 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 MDH1BQ5I0G3 518 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 ANKRD54Q6NXT1 300 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 GJB7Q6PEY0 223 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 TCEAL8Q8IYN2 117 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 CRYBG2Q8N1P7 616 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 ATAD1Q8NBU5 361 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 MYCBPAPQ8TBZ2 947 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 WHAMMQ8TF30 809 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 PCMTD1Q96MG8 357 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-214ENST00000590556 KREMEN1Q96MU8 473 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 NAP1L5Q96NT1 182 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-214ENST00000590556 TWNKQ96RR1 684 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 LPIN3Q9BQK8 851 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 ABI2Q9NYB9 513 aaPredicted RBP20.4■□□□□ 0.86
DDX39A-214ENST00000590556 CLEC1BQ9P126 229 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 PCDHB5Q9Y5E4 795 aa20.4■□□□□ 0.86
DDX39A-214ENST00000590556 REV3LO60673 3130 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.39■□□□□ 0.85
DDX39A-214ENST00000590556 A0A1B0GTH6 734 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 ZMYND10O75800 440 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 C8AP07357 584 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 HOXB8P17481 243 aaPredicted RBP20.39■□□□□ 0.85
DDX39A-214ENST00000590556 CCDC142Q17RM4 750 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 UVSSAQ2YD98 709 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 ZNF394Q53GI3 561 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 PPM1LQ5SGD2 360 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 KLHDC7AQ5VTJ3 777 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 C4orf50Q6ZRC1 276 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 RTL10Q7L3V2 364 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 SPATA2LQ8IUW3 424 aaPredicted RBP20.39■□□□□ 0.85
DDX39A-214ENST00000590556 UBR7Q8N806 425 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 SLC7A14Q8TBB6 771 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 SPPL2BQ8TCT7 592 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 JAKMIP2Q96AA8 810 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 ERGIC2Q96RQ1 377 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 ELOVL4Q9GZR5 314 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 SFXN1Q9H9B4 322 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 PLCB1Q9NQ66 1216 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 COG5Q9UP83 839 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 SLC27A5Q9Y2P5 690 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 PCDHB4Q9Y5E5 795 aa20.39■□□□□ 0.85
DDX39A-214ENST00000590556 TEX33O43247 280 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 ACO1P21399 889 aaKnown RBP20.38■□□□□ 0.85
DDX39A-214ENST00000590556 KCNA5P22460 613 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 KLK7P49862 253 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 UBASH3AP57075 661 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 CYP27A1Q02318 531 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 DPY19L2P1Q6NXN4 242 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 TMEM270Q6UE05 265 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 C12orf76Q8N812 135 aaPredicted RBP20.38■□□□□ 0.85
DDX39A-214ENST00000590556 MYLPFQ96A32 169 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 TMEM176AQ96HP8 235 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 ABCB6Q9NP58 842 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 HSFX1Q9UBD0 423 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 DNAJC12Q9UKB3 198 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 SIK3Q9Y2K2 1263 aa20.38■□□□□ 0.85
DDX39A-214ENST00000590556 H3BQ06 376 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-214ENST00000590556 RFPL2O75678 378 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 TUFMP49411 452 aaKnown RBP20.37■□□□□ 0.85
DDX39A-214ENST00000590556 RAD23BP54727 409 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 NR1I3Q14994 352 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 ARHGAP44Q17R89 818 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 RARS2Q5T160 578 aaKnown RBP20.37■□□□□ 0.85
DDX39A-214ENST00000590556 IQCEQ6IPM2 695 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 SYCE2Q6PIF2 218 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 GAS2L3Q86XJ1 694 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 TTC9BQ8N6N2 239 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 SLC4A11Q8NBS3 891 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 PCED1BQ96HM7 432 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 FUBP3Q96I24 572 aaKnown RBP eCLIP20.37■□□□□ 0.85
DDX39A-214ENST00000590556 MSLNLQ96KJ4 702 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 HEXIM2Q96MH2 286 aaKnown RBP20.37■□□□□ 0.85
DDX39A-214ENST00000590556 RBSNQ9H1K0 784 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 CRISPLD1Q9H336 500 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 FAM207AQ9NSI2 230 aaPredicted RBP20.37■□□□□ 0.85
DDX39A-214ENST00000590556 ZDHHC7Q9NXF8 308 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 CD207Q9UJ71 328 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 INSL5Q9Y5Q6 135 aa20.37■□□□□ 0.85
DDX39A-214ENST00000590556 CCDC195A0A1B0GUA6 201 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 HNRNPA1P09651 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
DDX39A-214ENST00000590556 HAPLN1P10915 354 aaPredicted RBP20.36■□□□□ 0.85
DDX39A-214ENST00000590556 KRT5P13647 590 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 RFX1P22670 979 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 CLUL1Q15846 466 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 MGAT5BQ3V5L5 792 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 C12orf29Q8N999 325 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 NEK11Q8NG66 645 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 SEPT5Q99719 369 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms