RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PSMB7Q99436 277 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 GDF15Q99988 308 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 SELENOOQ9BVL4 669 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 MIS12Q9H081 205 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 WNT8AQ9H1J5 351 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 ANAPC7Q9UJX3 599 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
CCBE1-203ENST00000589116 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 A8MXQ7 604 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 M0QYV0 167 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 KCNK3O14649 394 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.36
CCBE1-203ENST00000589116 SETSIPP0DME0 302 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 CXCR5P32302 372 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 SLC1A1P43005 524 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 ORC1Q13415 861 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TUSC3Q13454 348 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 MAMLD1Q13495 774 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 MESDQ14696 234 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TMEM86AQ8N2M4 240 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 C3orf20Q8ND61 904 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 SPATA18Q8TC71 538 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TNIP3Q96KP6 325 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TOX2Q96NM4 488 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 CARD9Q9H257 536 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TSPAN16Q9UKR8 245 aa12.77□□□□□ -0.36
CCBE1-203ENST00000589116 TCRBV5S1A1TA0A578 114 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 CCDC66A2RUB6 948 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 MYO1FO00160 1098 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 DDX3YO15523 660 aaKnown RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 COMTP21964 271 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 GPD2P43304 727 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 AARSP49588 968 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 CLCNKBP51801 687 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 AFF1P51825 1210 aaKnown RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 ELF2Q15723 593 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 CLUL1Q15846 466 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 UPP1Q16831 310 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 PTPN20Q4JDL3 420 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 PLEKHG4Q58EX7 1191 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 TEX35Q5T0J7 233 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 DNAJC24Q6P3W2 148 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 GLB1LQ6UWU2 654 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 SLC39A5Q6ZMH5 540 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 ACOT1Q86TX2 421 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 RTN4RL1Q86UN2 441 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 TDHQ8IZJ6 230 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 ANKLE1Q8NAG6 615 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 FEZF2Q8TBJ5 459 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 ACTRT1Q8TDG2 376 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 SEPT8Q92599 483 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 ELAC1Q9H777 363 aaKnown RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 HESX1Q9UBX0 185 aa12.77□□□□□ -0.37
CCBE1-203ENST00000589116 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 CHORDC1Q9UHD1 332 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-203ENST00000589116 TMEM110-MUSTN1A8MSY1 372 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-203ENST00000589116 CYB561D2O14569 222 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 SPOPO43791 374 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
CCBE1-203ENST00000589116 NBNO60934 754 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 CTNNA2P26232 953 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 MAN1A1P33908 653 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 GABRB2P47870 512 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 DNA2P51530 1060 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 PDCLQ13371 301 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 PKDCCQ504Y2 493 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 RASGEF1CQ8N431 466 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 URGCPQ8TCY9 931 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 CD101Q93033 1021 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 TMEM161AQ9NX61 479 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 KANSL3Q9P2N6 904 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 TTC7AQ9ULT0 858 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-203ENST00000589116 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
CCBE1-203ENST00000589116 TSC2P49815 1807 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 CASTOR2A6NHX0 329 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 PGRMC1O00264 195 aaKnown RBP12.75□□□□□ -0.37
CCBE1-203ENST00000589116 GABRDO14764 452 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 PROSCO94903 275 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 POMCP01189 267 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 FGFR1P11362 822 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 CAPN2P17655 700 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms