RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CFAP69A5D8W1 941 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 NT5C1B-RDH14C9J2C7 533 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 F2RL2O00254 374 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 PHGDHO43175 533 aaKnown RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 FRS3O43559 492 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 MGEA5O60502 916 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 PEX14O75381 377 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 MTHFD1P11586 935 aaKnown RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 RPL17P18621 184 aaKnown RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 PRDX5P30044 214 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 ALDH1A3P47895 512 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 SLC10A2Q12908 348 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 GRM1Q13255 1194 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 BIRC2Q13490 618 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 POLD3Q15054 466 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 BRD3Q15059 726 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 SF3B3Q15393 1217 aaKnown RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 GEN1Q17RS7 908 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 FCRLBQ6BAA4 426 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 IL31Q6EBC2 164 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 NLGN4YQ8NFZ3 816 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 BRIX1Q8TDN6 353 aaKnown RBP4.3□□□□□ -1.72
SMAD4-207ENST00000589076 LRTOMTQ8WZ04 291 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 DDB2Q92466 427 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 BHMT2Q9H2M3 363 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 NRIP3Q9NQ35 241 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 CHST12Q9NRB3 414 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 TPCN1Q9ULQ1 816 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 NEU2Q9Y3R4 380 aa4.3□□□□□ -1.72
SMAD4-207ENST00000589076 ZNF804BA4D1E1 1349 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 A0A1W2PPL8 197 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 GCOM1H8Y6P7 765 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 WNT10BO00744 389 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PMM2O15305 246 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 IFIT2P09913 472 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 MYF5P13349 255 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PEX2P28328 305 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PROK1P58294 105 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 GPR162Q16538 588 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 SUMO4Q6EEV6 95 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PEG10Q86TG7 708 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 FAM90A1Q86YD7 464 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 KRT78Q8N1N4 520 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 DCBLD1Q8N8Z6 715 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 MARS2Q96GW9 593 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 APIPQ96GX9 242 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 SLC39A13Q96H72 371 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PGBD1Q96JS3 809 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 FCRL4Q96PJ5 515 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 RPS6KC1Q96S38 1066 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 KRTAP1-5Q9BYS1 174 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 LRRC27Q9C0I9 530 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 MRPL46Q9H2W6 279 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 ZMAT3Q9HA38 289 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 CNNM1Q9NRU3 951 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 INTS13Q9NVM9 706 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PIH1D1Q9NWS0 290 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 ZDHHC8Q9ULC8 765 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
SMAD4-207ENST00000589076 PCDHA1Q9Y5I3 950 aa4.29□□□□□ -1.72
SMAD4-207ENST00000589076 GRM6O15303 877 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 PQBP1O60828 265 aaKnown RBP4.28□□□□□ -1.72
SMAD4-207ENST00000589076 CD1AP06126 327 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 GNAI3P08754 354 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 CBSLP0DN79 551 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 SRGNP10124 158 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 SLC6A2P23975 617 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 CBSP35520 551 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 PIK3CGP48736 1102 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 NEK3P51956 506 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 MAPK10P53779 464 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 AK2P54819 239 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 GNAI1P63096 354 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 FPGSQ05932 587 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 MTX3Q5HYI7 312 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 SWSAP1Q6NVH7 229 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 VWA1Q6PCB0 445 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 UBE3BQ7Z3V4 1068 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 CLNKQ7Z7G1 428 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 PPP1R3BQ86XI6 285 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 TOR1AIP2Q8NFQ8 470 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 IL31RAQ8NI17 732 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 PMM1Q92871 262 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 SUCLG2Q96I99 432 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 TNIP3Q96KP6 325 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 NT5C1BQ96P26 610 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 STRBPQ96SI9 672 aaKnown RBP4.28□□□□□ -1.72
SMAD4-207ENST00000589076 MYOCQ99972 504 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 NAA15Q9BXJ9 866 aaKnown RBP4.28□□□□□ -1.72
SMAD4-207ENST00000589076 C22orf23Q9BZE7 217 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 ATP6V0A4Q9HBG4 840 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 FBXO34Q9NWN3 711 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 STAP2Q9UGK3 403 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 SLC23A1Q9UHI7 598 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 PHTF1Q9UMS5 762 aa4.28□□□□□ -1.72
SMAD4-207ENST00000589076 PCDHA6Q9UN73 950 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms