RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 OLA1Q9NTK5 396 aaKnown RBP8.75□□□□□ -1.01
VMP1-208ENST00000588617 LPAR3Q9UBY5 353 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 CAPN11Q9UMQ6 739 aa8.75□□□□□ -1.01
VMP1-208ENST00000588617 ANKRD18BA2A2Z9 1011 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 COQ9O75208 318 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 AGFG2O95081 481 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 KIF20AO95235 890 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 GLP2RO95838 553 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 AMHP03971 560 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 GLI1P08151 1106 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 XRCC6P12956 609 aaKnown RBP eCLIP8.74□□□□□ -1.018e-25■■■□□ 15.3
VMP1-208ENST00000588617 IGFBP6P24592 240 aaPredicted RBP8.74□□□□□ -1.01
VMP1-208ENST00000588617 BCAT1P54687 386 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 ACTR2P61160 394 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 SCAPQ12770 1279 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 ZNF827Q17R98 1081 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 SLC5A9Q2M3M2 681 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 TRIM71Q2Q1W2 868 aaKnown RBP8.74□□□□□ -1.01
VMP1-208ENST00000588617 GAGE13Q4V321 117 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 SLC45A4Q5BKX6 768 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 FAM160B1Q5W0V3 765 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 TCP11L2Q8N4U5 519 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 OR14K1Q8NGZ2 314 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 CSGALNACT1Q8TDX6 532 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 MZB1Q8WU39 189 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 CENPIQ92674 756 aaPredicted RBP8.74□□□□□ -1.01
VMP1-208ENST00000588617 TRAPPC9Q96Q05 1148 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 CHCHD6Q9BRQ6 235 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 EPS8L2Q9H6S3 715 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 AASSQ9UDR5 926 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 JAG2Q9Y219 1238 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 DTNAQ9Y4J8 743 aa8.74□□□□□ -1.01
VMP1-208ENST00000588617 CHEK2O96017 543 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 POMCP01189 267 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 LIMS1P48059 325 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 ALDH18A1P54886 795 aaKnown RBP8.73□□□□□ -1.01
VMP1-208ENST00000588617 VAMP2P63027 116 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 NSUN2Q08J23 767 aaKnown RBP eCLIP8.73□□□□□ -1.01
VMP1-208ENST00000588617 INSCQ1MX18 579 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 PLA1AQ53H76 456 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 PRR31Q5SQ13 230 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 SPATA1Q5VX52 437 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 FCRL6Q6DN72 434 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 TMEM132EQ6IEE7 984 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 MRNIPQ6NTE8 343 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 Q6ZUG5 572 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 USP30Q70CQ3 517 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 RRAGAQ7L523 313 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 FASTKD5Q7L8L6 764 aaKnown RBP8.73□□□□□ -1.01
VMP1-208ENST00000588617 REXO1L1PQ8IX06 675 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 TMIEQ8NEW7 156 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 DNERQ8NFT8 737 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 OR6Y1Q8NGX8 325 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 RBM15Q96T37 977 aaKnown RBP eCLIP8.73□□□□□ -1.019e-6■□□□□ 8.2
VMP1-208ENST00000588617 IMPG2Q9BZV3 1241 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 ENKD1Q9H0I2 346 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 EPC1Q9H2F5 836 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 TP63Q9H3D4 680 aaPredicted RBP8.73□□□□□ -1.01
VMP1-208ENST00000588617 PREBQ9HCU5 417 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 XPNPEP3Q9NQH7 507 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 CA14Q9ULX7 337 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
VMP1-208ENST00000588617 CCP110O43303 1012 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 ADAMTS4O75173 837 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 PRKCBP05771 671 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 ZNF888P0CJ79 500 aaPredicted RBP8.72□□□□□ -1.01
VMP1-208ENST00000588617 SRGAP2BP0DMP2 458 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 CYP2C9P11712 490 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 ZNF28P17035 718 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 PTDSS1P48651 473 aaKnown RBP8.72□□□□□ -1.01
VMP1-208ENST00000588617 PTTG1IPP53801 180 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 SEC24CP53992 1094 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 NPEPPSP55786 919 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 WNT3P56703 355 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 CLRN1P58418 232 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 POU5F1Q01860 360 aaKnown RBP8.72□□□□□ -1.01
VMP1-208ENST00000588617 MRPL49Q13405 166 aaKnown RBP8.72□□□□□ -1.01
VMP1-208ENST00000588617 KCNAB1Q14722 419 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 NPY5RQ15761 445 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 SIAH1Q8IUQ4 282 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 IGDCC3Q8IVU1 814 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 TSPYL6Q8N831 410 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 CPT1CQ8TCG5 803 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 NUP133Q8WUM0 1156 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 ZBTB26Q9HCK0 441 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 FBXO34Q9NWN3 711 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 TMEM160Q9NX00 188 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 DKK4Q9UBT3 224 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 MBD1Q9UIS9 605 aaPredicted RBP8.72□□□□□ -1.01
VMP1-208ENST00000588617 ARHGAP26Q9UNA1 814 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 PNPLA7Q6ZV29 1317 aa8.72□□□□□ -1.01
VMP1-208ENST00000588617 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.02
VMP1-208ENST00000588617 H0Y3Z8 333 aa8.71□□□□□ -1.02
VMP1-208ENST00000588617 PJA2O43164 708 aa8.71□□□□□ -1.02
VMP1-208ENST00000588617 HYAL3O43820 417 aaPredicted RBP8.71□□□□□ -1.02
VMP1-208ENST00000588617 TK1P04183 234 aa8.71□□□□□ -1.02
VMP1-208ENST00000588617 ZSCAN22P10073 491 aaPredicted RBP8.71□□□□□ -1.02
VMP1-208ENST00000588617 RRM1P23921 792 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms