RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
HDAC5-206ENST00000587776 CCSER1Q9C0I3 900 aa16.33■□□□□ 0.2
HDAC5-206ENST00000587776 ARRDC1-AS1Q9H2J1 176 aa16.33■□□□□ 0.2
HDAC5-206ENST00000587776 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
HDAC5-206ENST00000587776 TDP1Q9NUW8 608 aa16.33■□□□□ 0.2
HDAC5-206ENST00000587776 CCL26Q9Y258 94 aa16.33■□□□□ 0.2
HDAC5-206ENST00000587776 TPRP12270 2363 aaKnown RBP16.33■□□□□ 0.2
HDAC5-206ENST00000587776 KRT37O76014 449 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 CSH1P0DML2 217 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 CSH2P0DML3 217 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 PNPLA4P41247 253 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
HDAC5-206ENST00000587776 GRIN1Q05586 938 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 POSTNQ15063 836 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 CCDC6Q16204 474 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 TMEM196Q5HYL7 178 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
HDAC5-206ENST00000587776 TXNDC8Q6A555 127 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 PKN3Q6P5Z2 889 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 BRAPQ7Z569 592 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 STKLD1Q8NE28 680 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 USP13Q92995 863 aaPredicted RBP16.32■□□□□ 0.2
HDAC5-206ENST00000587776 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 HVCN1Q96D96 273 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 HPS4Q9NQG7 708 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
HDAC5-206ENST00000587776 STYXL1Q9Y6J8 313 aa16.32■□□□□ 0.2
HDAC5-206ENST00000587776 HUS1O60921 280 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 RNF40O75150 1001 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 ARSAP15289 507 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 POLR2BP30876 1174 aaKnown RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 GPR15P49685 360 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 SF3A2Q15428 464 aaKnown RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 NFE2Q16621 373 aaPredicted RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 SDHAF4Q5VUM1 108 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 NT5DC4Q86YG4 428 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 ST6GALNAC4Q9H4F1 302 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 MRPL44Q9H9J2 332 aaKnown RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 TMLHEQ9NVH6 421 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
HDAC5-206ENST00000587776 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
HDAC5-206ENST00000587776 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 EPN2O95208 641 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 EGFP01133 1207 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 F11P03951 625 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 ITGB3P05106 788 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 HMGA1P17096 107 aaKnown RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 DDIT3P35638 169 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 RPL10AP62906 217 aaKnown RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 MYL7Q01449 175 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 ST3GAL2Q16842 350 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 CRELD2Q6UXH1 353 aaPredicted RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 ZNF720Q7Z2F6 126 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 KBTBD6Q86V97 674 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 PDCL2Q8N4E4 241 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 CPA6Q8N4T0 437 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 SAAL1Q96ER3 474 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 LOXL4Q96JB6 756 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 DDX43Q9NXZ2 648 aaKnown RBP16.3■□□□□ 0.2
HDAC5-206ENST00000587776 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
HDAC5-206ENST00000587776 NUP205Q92621 2012 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 CCDC163A0A0D9SF12 145 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 OTOL1A6NHN0 477 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-206ENST00000587776 GCNT3O95395 438 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 KRT19P08727 400 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 DRD1P21728 446 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 ACAT1P24752 427 aaKnown RBP16.29■□□□□ 0.2
HDAC5-206ENST00000587776 TXLNAP40222 546 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 PSMD2Q13200 908 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 DDR2Q16832 855 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 MON1AQ86VX9 555 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-206ENST00000587776 ACCSQ96QU6 501 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 HHIPQ96QV1 700 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 P2RY13Q9BPV8 354 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
HDAC5-206ENST00000587776 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
HDAC5-206ENST00000587776 SEL1LQ9UBV2 794 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 L1RE1Q9UN81 338 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
HDAC5-206ENST00000587776 ACACBO00763 2458 aa16.29■□□□□ 0.2
HDAC5-206ENST00000587776 THADAQ6YHU6 1953 aa16.28■□□□□ 0.2
HDAC5-206ENST00000587776 PTPRDP23468 1912 aa16.28■□□□□ 0.2
HDAC5-206ENST00000587776 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms