RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 DCNP07585 359 aaKnown RBP18.96■□□□□ 0.63
TPM4-206ENST00000587201 PSMC3P17980 439 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 CDC25CP30307 473 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 CASP4P49662 377 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 GPR15P49685 360 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 GPR158Q5T848 1215 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 VITQ6UXI7 678 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 SPATA2LQ8IUW3 424 aaPredicted RBP18.96■□□□□ 0.63
TPM4-206ENST00000587201 SLC9A9Q8IVB4 645 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 DTWD2Q8NBA8 298 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 PLEKHO2Q8TD55 490 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 DEPDC1BQ8WUY9 529 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 KBTBD7Q8WVZ9 684 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 E2F7Q96AV8 911 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 CCDC34Q96HJ3 373 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 FOXQ1Q9C009 403 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
TPM4-206ENST00000587201 DMAC2Q9NW81 257 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 KANSL1LA0AUZ9 987 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 MYBPHLA2RUH7 354 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 HEPACAM2A8MVW5 462 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 CALUO43852 315 aaPredicted RBP18.95■□□□□ 0.62
TPM4-206ENST00000587201 NR3C1P04150 777 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 WARSP23381 471 aaKnown RBP18.95■□□□□ 0.62
TPM4-206ENST00000587201 CYP2F1P24903 491 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 GDI1P31150 447 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 MRE11P49959 708 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 RPL10AP62906 217 aaKnown RBP18.95■□□□□ 0.62
TPM4-206ENST00000587201 TNNC1P63316 161 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 CYP4F8P98187 520 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 BIRC3Q13489 604 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 CCDC142Q17RM4 750 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 WDR72Q3MJ13 1102 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 LIMS2Q7Z4I7 341 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 GPIHBP1Q8IV16 184 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 PJA1Q8NG27 643 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 PARD3BQ8TEW8 1205 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 DNASE1L2Q92874 299 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 IRF7Q92985 503 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 PHOX2BQ99453 314 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 PKMYT1Q99640 499 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 SYT15Q9BQS2 421 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 ABCB6Q9NP58 842 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 HEBP1Q9NRV9 189 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 CDH9Q9ULB4 789 aa18.95■□□□□ 0.62
TPM4-206ENST00000587201 MAGED2Q9UNF1 606 aaPredicted RBP18.95■□□□□ 0.62
TPM4-206ENST00000587201 LRRIQ3A6PVS8 624 aaPredicted RBP18.94■□□□□ 0.62
TPM4-206ENST00000587201 DPYSL4O14531 572 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 ATP2C2O75185 946 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 CLSTN1O94985 981 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 PDGFRBP09619 1106 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 CSH1P0DML2 217 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 CSH2P0DML3 217 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 LMO2P25791 158 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 AP3M2P53677 418 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 MYL6P60660 151 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 PSMC1P62191 440 aaKnown RBP18.94■□□□□ 0.62
TPM4-206ENST00000587201 UBXN2BQ14CS0 331 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 DDR2Q16832 855 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 SDHAF4Q5VUM1 108 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 C4orf50Q6ZRC1 276 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 TPRG1Q6ZUI0 275 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 ARID3BQ8IVW6 561 aaPredicted RBP18.94■□□□□ 0.62
TPM4-206ENST00000587201 MFSD6LQ8IWD5 586 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 YAF2Q8IY57 180 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 STKLD1Q8NE28 680 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 TMEM174Q8WUU8 243 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 FUBP3Q96I24 572 aaKnown RBP eCLIP18.94■□□□□ 0.62
TPM4-206ENST00000587201 MRPL45Q9BRJ2 306 aaKnown RBP18.94■□□□□ 0.62
TPM4-206ENST00000587201 MKNK1Q9BUB5 465 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 SNX25Q9H3E2 840 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 IL21Q9HBE4 155 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 MAPK8IP1Q9UQF2 711 aa18.94■□□□□ 0.62
TPM4-206ENST00000587201 ZNF263O14978 683 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 HMGA1P17096 107 aaKnown RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 CD72P21854 359 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 ATICP31939 592 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 GNL1P36915 607 aaPredicted RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 KCNB1Q14721 858 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 CFAP221Q4G0U5 840 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 TDRD10Q5VZ19 366 aaKnown RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 FAM171BQ6P995 826 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 SCN4BQ8IWT1 228 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 OR6B3Q8NGW1 331 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 MYLPFQ96A32 169 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 SYAP1Q96A49 352 aaPredicted RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 DDX23Q9BUQ8 820 aaKnown RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 TASP1Q9H6P5 420 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 MAGEC2Q9UBF1 373 aaPredicted RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 NXF1Q9UBU9 619 aaKnown RBP18.93■□□□□ 0.62
TPM4-206ENST00000587201 TRAF3IP3Q9Y228 551 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 FRMD4BQ9Y2L6 1034 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 NCANO14594 1321 aa18.93■□□□□ 0.62
TPM4-206ENST00000587201 LRRN2O75325 713 aa18.92■□□□□ 0.62
TPM4-206ENST00000587201 TACC1O75410 805 aa18.92■□□□□ 0.62
TPM4-206ENST00000587201 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
TPM4-206ENST00000587201 C4BPAP04003 597 aaKnown RBP18.92■□□□□ 0.62
TPM4-206ENST00000587201 FAM163BP0C2L3 166 aa18.92■□□□□ 0.62
TPM4-206ENST00000587201 ANGPT1Q15389 498 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms