RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 AKAP3O75969 853 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 CD2BP2O95400 341 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 LDHAP00338 332 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 GAP43P17677 238 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 DRD1P21728 446 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 RAP1GAPP47736 663 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 LIMK1P53667 647 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 RPL10AP62906 217 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 BFSP1Q12934 665 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 PDGFRLQ15198 375 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 FBXO43Q4G163 708 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 PPM1JQ5JR12 505 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 DYMQ7RTS9 669 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 CACNA2D4Q7Z3S7 1137 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 SFR1Q86XK3 245 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 BRSK2Q8IWQ3 736 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 TMEM86AQ8N2M4 240 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 PDCL2Q8N4E4 241 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 CAMKK1Q8N5S9 505 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 LRRC52Q8N7C0 313 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 MAB21L3Q8N8X9 362 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 SPATA18Q8TC71 538 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 CACTINQ8WUQ7 758 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 GAB3Q8WWW8 586 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 EXOC4Q96A65 974 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 CHFRQ96EP1 664 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 EPSTI1Q96J88 318 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 ACCSQ96QU6 501 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 SMG9Q9H0W8 520 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 HPS4Q9NQG7 708 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 TMLHEQ9NVH6 421 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 GDAP2Q9NXN4 497 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 SLC8A2Q9UPR5 921 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 EXOC7Q9UPT5 735 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 CCL26Q9Y258 94 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 MYH11P35749 1972 aa8.64□□□□□ -1.03
CAPNS1-203ENST00000586963 OTOL1A6NHN0 477 aaPredicted RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 AXIN1O15169 862 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 GDF9O60383 454 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 HUS1O60921 280 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 RPP40O75818 363 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 NOL4O94818 638 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 EPN2O95208 641 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 ZNF806P0C7X5 589 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 GARTP22102 1010 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 POLR2BP30876 1174 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 HOXC13P31276 330 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 GALK1P51570 392 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 CDR1P51861 262 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 TFAMQ00059 246 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 MYL7Q01449 175 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 FAM160A1Q05DH4 1040 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 KCNA1Q09470 495 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 ALCAMQ13740 583 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 CFAP221Q4G0U5 840 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 L1TD1Q5T7N2 865 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 TXNDC8Q6A555 127 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 TRIM68Q6AZZ1 485 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 CC2D1AQ6P1N0 951 aaPredicted RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 PKN3Q6P5Z2 889 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 USP49Q70CQ1 688 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 SV2BQ7L1I2 683 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 CXorf38Q8TB03 319 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 DNAJC19Q96DA6 116 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 FUBP3Q96I24 572 aaKnown RBP eCLIP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 ZC3H10Q96K80 434 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 PKMYT1Q99640 499 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 FAM213AQ9BRX8 229 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 PI4K2AQ9BTU6 479 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 IKZF4Q9H2S9 585 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 EBF3Q9H4W6 596 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 TMEM206Q9H813 350 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 MRPL44Q9H9J2 332 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 UPF2Q9HAU5 1272 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 OLFML3Q9NRN5 406 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 DDX43Q9NXZ2 648 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 ITGA11Q9UKX5 1188 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 L1RE1Q9UN81 338 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 MAGED2Q9UNF1 606 aaPredicted RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 AGAP1Q9UPQ3 857 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 PCDHB13Q9Y5F0 798 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 PCDHGA5Q9Y5G8 931 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 SRPRBQ9Y5M8 271 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 LAMA1P25391 3075 aa8.63□□□□□ -1.03
CAPNS1-203ENST00000586963 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 MYMKA6NI61 221 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 GABRDO14764 452 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 TM4SF5O14894 197 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 RNF40O75150 1001 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 TADA3O75528 432 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 EGFP01133 1207 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 ITGB3P05106 788 aa8.62□□□□□ -1.03
CAPNS1-203ENST00000586963 ARSAP15289 507 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms