RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 GRSF1Q12849 480 aaKnown RBP eCLIP16.4■□□□□ 0.22
MBD1-215ENST00000586884 ZNF268Q14587 947 aaPredicted RBP16.4■□□□□ 0.22
MBD1-215ENST00000586884 L1TD1Q5T7N2 865 aaKnown RBP16.4■□□□□ 0.22
MBD1-215ENST00000586884 USP49Q70CQ1 688 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 MON1AQ86VX9 555 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 BRSK2Q8IWQ3 736 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 TMEM86AQ8N2M4 240 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 FAM160A2Q8N612 972 aaPredicted RBP16.4■□□□□ 0.22
MBD1-215ENST00000586884 LRRC52Q8N7C0 313 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
MBD1-215ENST00000586884 CNTNAP3BQ96NU0 1288 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 ACCSQ96QU6 501 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 ACBD6Q9BR61 282 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 FAM213AQ9BRX8 229 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 CNTNAP3Q9BZ76 1288 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
MBD1-215ENST00000586884 EXTL3O43909 919 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 HUS1O60921 280 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 LDHAP00338 332 aaKnown RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 ITGB3P05106 788 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 ADRB1P08588 477 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 GARTP22102 1010 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 POLR2BP30876 1174 aaKnown RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 RPL10AP62906 217 aaKnown RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 MYL7Q01449 175 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 KCNA1Q09470 495 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 ALCAMQ13740 583 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 PDGFRLQ15198 375 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 RRAGBQ5VZM2 374 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 TXNDC8Q6A555 127 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 FSTL4Q6MZW2 842 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 CC2D1AQ6P1N0 951 aaPredicted RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 C1orf127Q8N9H9 656 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 SPATA18Q8TC71 538 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 GAB3Q8WWW8 586 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 EXOC4Q96A65 974 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 DNAJC19Q96DA6 116 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 TRMT2BQ96GJ1 504 aaKnown RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 PI4K2AQ9BTU6 479 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 OLFML3Q9NRN5 406 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 RBAKQ9NYW8 714 aaPredicted RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 FBXO2Q9UK22 296 aaPredicted RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 L1RE1Q9UN81 338 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 AGAP1Q9UPQ3 857 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 PCDHB13Q9Y5F0 798 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 SRPRBQ9Y5M8 271 aaKnown RBP16.39■□□□□ 0.21
MBD1-215ENST00000586884 ANK1P16157 1881 aa16.39■□□□□ 0.21
MBD1-215ENST00000586884 SCN1AP35498 2009 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 KIF26AQ9ULI4 1882 aaPredicted RBP16.38■□□□□ 0.21
MBD1-215ENST00000586884 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
MBD1-215ENST00000586884 MYMKA6NI61 221 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 NOL4O94818 638 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 GCNT3O95395 438 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 PDCP20941 246 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 INTS6LQ5JSJ4 861 aaKnown RBP16.38■□□□□ 0.21
MBD1-215ENST00000586884 TRIM68Q6AZZ1 485 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 DDX1Q92499 740 aaKnown RBP16.38■□□□□ 0.21
MBD1-215ENST00000586884 CHFRQ96EP1 664 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 SAAL1Q96ER3 474 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 MYRFLQ96LU7 910 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 GDAP2Q9NXN4 497 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 DDX43Q9NXZ2 648 aaKnown RBP16.38■□□□□ 0.21
MBD1-215ENST00000586884 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 SLC8A2Q9UPR5 921 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 CLIC4Q9Y696 253 aa16.38■□□□□ 0.21
MBD1-215ENST00000586884 OTOL1A6NHN0 477 aaPredicted RBP16.37■□□□□ 0.21
MBD1-215ENST00000586884 RPP40O75818 363 aaKnown RBP16.37■□□□□ 0.21
MBD1-215ENST00000586884 AKAP3O75969 853 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 DRD1P21728 446 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 GPR15P49685 360 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 WNT7BP56706 349 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 DDR2Q16832 855 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 PPM1JQ5JR12 505 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 PKN3Q6P5Z2 889 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 CCDC73Q6ZRK6 1079 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 SYCP3Q8IZU3 236 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 CAMKK1Q8N5S9 505 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 CXorf38Q8TB03 319 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 PKMYT1Q99640 499 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 TMEM206Q9H813 350 aa16.37■□□□□ 0.21
MBD1-215ENST00000586884 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
MBD1-215ENST00000586884 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
MBD1-215ENST00000586884 TADA3O75528 432 aa16.36■□□□□ 0.21
MBD1-215ENST00000586884 ACAT1P24752 427 aaKnown RBP16.36■□□□□ 0.21
MBD1-215ENST00000586884 CYP2F1P24903 491 aa16.36■□□□□ 0.21
MBD1-215ENST00000586884 PCSK1P29120 753 aa16.36■□□□□ 0.21
MBD1-215ENST00000586884 HOXC13P31276 330 aa16.36■□□□□ 0.21
MBD1-215ENST00000586884 LHX1P48742 406 aa16.36■□□□□ 0.21
MBD1-215ENST00000586884 RBP5P82980 135 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms