RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TTC39CQ8N584 583 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 C1orf131Q8NDD1 294 aaKnown RBP21.69■■□□□ 1.06
ATG4D-204ENST00000586417 SPATA4Q8NEY3 305 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 PBKQ96KB5 322 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 BTBD6Q96KE9 485 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.69■■□□□ 1.06
ATG4D-204ENST00000586417 ZNF518BQ9C0D4 1074 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 INPP5FQ9Y2H2 1132 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 PCDHB7Q9Y5E2 793 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 TDRD15B5MCY1 1934 aaKnown RBP21.68■■□□□ 1.06
ATG4D-204ENST00000586417 XPOTO43592 962 aaKnown RBP21.68■■□□□ 1.06
ATG4D-204ENST00000586417 UPP2O95045 317 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 CD19P15391 556 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 H2AFXP16104 143 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-204ENST00000586417 SCNN1GP51170 649 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 NDST1P52848 882 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 WDR5P61964 334 aaKnown RBP21.68■■□□□ 1.06
ATG4D-204ENST00000586417 MESDQ14696 234 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 TMEM240Q5SV17 173 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 DENND1BQ6P3S1 775 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 TMEM35BQ8NCS4 154 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 MSANTD4Q8NCY6 345 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 PPP1R10Q96QC0 940 aaKnown RBP21.68■■□□□ 1.06
ATG4D-204ENST00000586417 RPS6KC1Q96S38 1066 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 ELAC1Q9H777 363 aaKnown RBP21.68■■□□□ 1.06
ATG4D-204ENST00000586417 SNX9Q9Y5X1 595 aa21.68■■□□□ 1.06
ATG4D-204ENST00000586417 FGBP02675 491 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 PAFAH1B1P43034 410 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 C2orf54Q08AI8 447 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 PLEKHA7Q6IQ23 1121 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 FBXO38Q6PIJ6 1188 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 FAM43BQ6ZT52 329 aaPredicted RBP21.67■■□□□ 1.06
ATG4D-204ENST00000586417 PHLDB2Q86SQ0 1253 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 LHX5Q9H2C1 402 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 GOLGA2P5Q9HBQ8 144 aa21.67■■□□□ 1.06
ATG4D-204ENST00000586417 MED7O43513 233 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 POMCP01189 267 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 COMTP21964 271 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 LIN9Q5TKA1 542 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 CPNE8Q86YQ8 564 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 CD101Q93033 1021 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 LBHD1Q9BQE6 289 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-204ENST00000586417 MRPL45Q9BRJ2 306 aaKnown RBP21.66■■□□□ 1.06
ATG4D-204ENST00000586417 TRIM7Q9C029 511 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 CXXC1Q9P0U4 656 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-204ENST00000586417 CACNG4Q9UBN1 327 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 FNDC1Q4ZHG4 1894 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-204ENST00000586417 TMEM110-MUSTN1A8MSY1 372 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 SPTLC1O15269 473 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 DCAF12L1Q5VU92 463 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 RASGEF1CQ8N431 466 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 MMGT1Q8N4V1 131 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 PARD6BQ9BYG5 372 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 UBN1Q9NPG3 1134 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 ANAPC7Q9UJX3 599 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 LRFN2Q9ULH4 789 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 NME7Q9Y5B8 376 aa21.66■■□□□ 1.06
ATG4D-204ENST00000586417 TCRBV5S1A1TA0A578 114 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 VDRP11473 427 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 LRPAP1P30533 357 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 MAMLD1Q13495 774 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 SOWAHAQ2M3V2 549 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 NPAS4Q8IUM7 802 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 ACTRT1Q8TDG2 376 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 ALG3Q92685 438 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 ZNF560Q96MR9 790 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 NT5C1AQ9BXI3 368 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 GDAP2Q9NXN4 497 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 CYTH4Q9UIA0 394 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.65■■□□□ 1.06
ATG4D-204ENST00000586417 NR2E3Q9Y5X4 410 aa21.65■■□□□ 1.06
ATG4D-204ENST00000586417 ZBBXA8MT70 800 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 MIF4GDA9UHW6 222 aaKnown RBP21.64■■□□□ 1.06
ATG4D-204ENST00000586417 O00370 1275 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 BAIAP3O94812 1187 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 RHOXF2BP0C7M4 288 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 PNPLA4P41247 253 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 FAM117BQ6P1L5 589 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 GLB1LQ6UWU2 654 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 LIMS2Q7Z4I7 341 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 UBE2Q2Q8WVN8 375 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 TOP1MTQ969P6 601 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 PNKPQ96T60 521 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 RHOXF2Q9BQY4 288 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 CARD9Q9H257 536 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 RBM12Q9NTZ6 932 aaKnown RBP21.64■■□□□ 1.06
ATG4D-204ENST00000586417 CEP83Q9Y592 693 aa21.64■■□□□ 1.06
ATG4D-204ENST00000586417 KPNA7A9QM74 516 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 INPPL1O15357 1258 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 CEP104O60308 925 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 MICAL2O94851 1124 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 CALB1P05937 261 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 THP07101 528 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 MAGEA10P43363 369 aaPredicted RBP21.64■■□□□ 1.05
ATG4D-204ENST00000586417 MARCKSL1P49006 195 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 CNGA2Q16280 664 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 KRT35Q92764 455 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 CASD1Q96PB1 797 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 SELENOOQ9BVL4 669 aa21.64■■□□□ 1.05
ATG4D-204ENST00000586417 KIAA1257Q9ULG3 409 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms