RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 UBR7Q8N806 425 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 DBF4BQ8NFT6 615 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 ELMO3Q96BJ8 720 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 NAP1L3Q99457 506 aaPredicted RBP6.56□□□□□ -1.36
LIG3-206ENST00000586058 MED10Q9BTT4 135 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 NUP85Q9BW27 656 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 SLC4A5Q9BY07 1137 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 PACSIN1Q9BY11 444 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 LACRTQ9GZZ8 138 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 THAP2Q9H0W7 228 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 AVENQ9NQS1 362 aaPredicted RBP6.56□□□□□ -1.36
LIG3-206ENST00000586058 ST7Q9NRC1 585 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 PARVAQ9NVD7 372 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 TRIM10Q9UDY6 481 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 ANAPC7Q9UJX3 599 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.56□□□□□ -1.36
LIG3-206ENST00000586058 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 PLXNA4Q9HCM2 1894 aa6.56□□□□□ -1.36
LIG3-206ENST00000586058 SF3B1O75533 1304 aaKnown RBP eCLIP6.55□□□□□ -1.363e-9■■■■■ 206.8
LIG3-206ENST00000586058 TET1Q8NFU7 2136 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 GREB1Q4ZG55 1949 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 GOLGA6L10A0A0M3HER8 536 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CTAGE15A4D2H0 777 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 TMEM110-MUSTN1A8MSY1 372 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 C9IYK1 514 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 MYO1FO00160 1098 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 MGEA5O60502 916 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 B3GAT3O94766 335 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 BAIAP3O94812 1187 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CYP1A1P04798 512 aaPredicted RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 CTAGE8P0CG41 777 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 UNGP13051 313 aaPredicted RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 WARSP23381 471 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 SLC1A1P43005 524 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SSR1P43307 286 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 ACADSBP45954 432 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 RAD23BP54727 409 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CDH8P55286 799 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 LILRA4P59901 499 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 TLE2Q04725 743 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 FAAP100Q0VG06 881 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 BST2Q10589 180 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 RPS6KA1Q15418 735 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CNGA2Q16280 664 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CFAP221Q4G0U5 840 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SPOUT1Q5T280 376 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 DCLRE1AQ6PJP8 1040 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 C4orf50Q6ZRC1 276 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 MMS22LQ6ZRQ5 1243 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 ACOT1Q86TX2 421 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CTAGE6Q86UF2 777 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 ZDHHC17Q8IUH5 632 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CTAGE4Q8IX94 777 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 MCOLN2Q8IZK6 566 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SLC4A11Q8NBS3 891 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 B3GALNT2Q8NCR0 500 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 C1orf131Q8NDD1 294 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 TPCN2Q8NHX9 752 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SLC35G2Q8TBE7 412 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CPA5Q8WXQ8 436 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 DDX1Q92499 740 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 GOLGA1Q92805 767 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CYFIP2Q96F07 1278 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SCLYQ96I15 445 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 PAWRQ96IZ0 340 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 SENP8Q96LD8 212 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 WDR24Q96S15 920 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 NCAPGQ9BPX3 1015 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SYT15Q9BQS2 421 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 SYT11Q9BT88 431 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 TRIM62Q9BVG3 475 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 COLEC11Q9BWP8 271 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 IRX2Q9BZI1 471 aaPredicted RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 LHX5Q9H2C1 402 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 MTIF3Q9H2K0 278 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 FAM49BQ9NUQ9 324 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 DDX43Q9NXZ2 648 aaKnown RBP6.55□□□□□ -1.36
LIG3-206ENST00000586058 RNF14Q9UBS8 474 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 IP6K2Q9UHH9 426 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CDC23Q9UJX2 597 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 TSPAN16Q9UKR8 245 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 CDH9Q9ULB4 789 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 TFR2Q9UP52 801 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 MRFAP1Q9Y605 127 aa6.55□□□□□ -1.36
LIG3-206ENST00000586058 UQCRHLA0A096LP55 91 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ABHD14A-ACY1A0A1B0GW23 586 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CCDC66A2RUB6 948 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 RCCD1A6NED2 376 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 TBKBP1A7MCY6 615 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 BHMG1C9JSJ3 638 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 TMEM189-UBE2V1I3L0A0 370 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 CES2O00748 559 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 ENC1O14682 589 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 INPPL1O15357 1258 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 MEFVO15553 781 aaPredicted RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 SART1O43290 800 aaKnown RBP6.54□□□□□ -1.36
LIG3-206ENST00000586058 NBNO60934 754 aa6.54□□□□□ -1.36
LIG3-206ENST00000586058 TADA2AO75478 443 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms