RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 CDH5P33151 784 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GPX6P59796 221 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 HIF1AQ16665 826 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PARP6Q2NL67 630 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 POLNQ7Z5Q5 900 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PCGF5Q86SE9 256 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 VSIG1Q86XK7 387 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 WDR49Q8IV35 697 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 THOC1Q96FV9 657 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MAK16Q9BXY0 300 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PHACTR1Q9C0D0 580 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SSU72Q9NP77 194 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EFR3BQ9Y2G0 817 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 C3orf70A6NLC5 250 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DCTN3O75935 186 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 WFS1O76024 890 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ALDH3A1P30838 453 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CLNS1AP54105 237 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC8A3P57103 927 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GEMIN4P57678 1058 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GRM1Q13255 1194 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CIAPIN1Q6FI81 312 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GPAT2Q6NUI2 795 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ACAD9Q9H845 621 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CISHQ9NSE2 258 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RABGEF1Q9UJ41 708 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CLUHO75153 1309 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ADCY3O60266 1144 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FAM189A1O60320 539 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 HARSP12081 509 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TNFSF9P41273 254 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MYL6P60660 151 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CRYMQ14894 314 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZC3H12AQ5D1E8 599 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZPBP2Q6X784 338 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ERICH1Q86X53 443 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF280CQ8ND82 737 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 C10orf82Q8WW14 230 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TEX13BQ9BXU2 312 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 NIF3L1Q9GZT8 377 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PCDHGC3Q9UN70 934 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GOLGA8SH3BPF8 625 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GOLGA8MH3BSY2 632 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 BANF1O75531 89 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 KRT4P19013 534 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ICAM3P32942 547 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF280AP59817 542 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SATB1Q01826 763 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CAPSQ13938 189 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF394Q53GI3 561 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 HHATQ5VTY9 493 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ANKMY2Q8IV38 441 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PPIL6Q8IXY8 311 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 INPP5DQ92835 1189 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MIEF2Q96C03 454 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MRRFQ96E11 262 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 MTMR12Q9C0I1 747 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CYLDQ9NQC7 956 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DOCK1Q14185 1865 aa14.93□□□□□ -0.02
CDK5RAP3-237ENST00000585163 IGKV6D-21A0A0A0MT36 114 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TTLL13PA6NNM8 815 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DIAPH2O60879 1101 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZWINTO95229 277 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FGFR1P11362 822 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TARSP26639 723 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RFC5P40937 340 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CTCFP49711 727 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CYP4A22Q5TCH4 519 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LVRNQ6Q4G3 990 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SCYL3Q8IZE3 742 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 AGGF1Q8N302 714 aaeCLIP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ACTL9Q8TC94 416 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TFAP2BQ92481 460 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 C12orf42Q96LP6 360 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TMEM237Q96Q45 408 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 AS3MTQ9HBK9 375 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SAE1Q9UBE0 346 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DPEP1P16444 411 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ATP2A2P16615 1042 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PHBP35232 272 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CCNG1P51959 295 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 HMGCS2P54868 508 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 OTUD4Q01804 1114 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC25A11Q02978 314 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 GAD2Q05329 585 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TARBP2Q15633 366 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 STXBP2Q15833 593 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SPDYAQ5MJ70 313 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ADGRD1Q6QNK2 874 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 NAT8LQ8N9F0 302 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ATP11CQ8NB49 1132 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PYROXD1Q8WU10 500 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CPT1BQ92523 772 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF75CPQ92670 426 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 DHRS4Q9BTZ2 278 aa14.92□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ADAM33Q9BZ11 813 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms