RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SPATA16Q9BXB7 569 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TMEM253P0C7T8 217 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 BRD2P25440 801 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PLIN5Q00G26 463 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TTC33Q6PID6 262 aaPredicted RBP13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TRAPPC11Q7Z392 1133 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TNIP2Q8NFZ5 429 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SEPT1Q8WYJ6 367 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PAIP2BQ9ULR5 123 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP4-210ENST00000585058 HEATR9A2RTY3 570 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CFAP99D6REC4 459 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NDUFB10O96000 172 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TARSP26639 723 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 GEMIN4P57678 1058 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 OVGP1Q12889 678 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FOXP3Q9BZS1 431 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 STMN3Q9NZ72 180 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KCNH4Q9UQ05 1017 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 H0YC42 278 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 AVPR1AP37288 418 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CCDC15Q0P6D6 951 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FAM117BQ6P1L5 589 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 GJB7Q6PEY0 223 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SETD3Q86TU7 594 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 STKLD1Q8NE28 680 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RIN3Q8TB24 985 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TADA1Q96BN2 335 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NCAM1P13591 858 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ITGA4P13612 1032 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ACADSBP45954 432 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 COPAP53621 1224 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CENPCQ03188 943 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SV2CQ496J9 727 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 LRRC71Q8N4P6 559 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PPP1R2P1Q96PQ5 205 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TRIM49D1C9J1S8 452 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 IL18RAPO95256 599 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KCNJ6P48051 423 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SP8Q8IXZ3 490 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KCNB2Q92953 911 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 THUMPD3Q9BV44 507 aaKnown RBP13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SLC40A1Q9NP59 571 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NAGPAQ9UK23 515 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FLT1P17948 1338 aa13.8□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PSMD14O00487 310 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NBNO60934 754 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MLNP12872 115 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 COILP38432 576 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FAXCQ5TGI0 409 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CHSY1Q86X52 802 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MRGBPQ9NV56 204 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TFR2Q9UP52 801 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 USP1O94782 785 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ZNF786Q8N393 782 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RIBC1Q8N443 379 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FEZF2Q8TBJ5 459 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 F8W810 466 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 GYPCP04921 128 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 EDRF1Q3B7T1 1238 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NAPEPLDQ6IQ20 393 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FAM111AQ96PZ2 611 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 VPS33BQ9H267 617 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 IMPAD1Q9NX62 359 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SKAP2O75563 359 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 GH1P01241 217 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NR3C2P08235 984 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KLRC1P26715 233 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TRIP4Q15650 581 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 IER5Q5VY09 327 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ARHGAP17Q68EM7 881 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 WWOXQ9NZC7 414 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SEPT3Q9UH03 358 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CRLS1Q9UJA2 301 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 QRICH2Q9H0J4 1663 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TRPC5OSA6NMA1 111 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 IRAK1P51617 712 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 EFL1Q7Z2Z2 1120 aaKnown RBP13.79□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PMPCBO75439 489 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms