RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 PIGRP01833 764 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 F11P03951 625 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 PLA2G4BP0C869 781 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 ARSAP15289 507 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 U2AF2P26368 475 aaKnown RBP eCLIP14.42□□□□□ -0.1
COPS3-218ENST00000584216 GJA4P35212 333 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 DGKEP52429 567 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 TSPY1Q01534 308 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 ST3GAL1Q11201 340 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 NFE2Q16621 373 aaPredicted RBP14.42□□□□□ -0.1
COPS3-218ENST00000584216 CCDC83Q8IWF9 413 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 TMEM130Q8N3G9 435 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 TSTD1Q8NFU3 115 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 OSCP1Q8WVF1 389 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 PYM1Q9BRP8 204 aaKnown RBP14.42□□□□□ -0.1
COPS3-218ENST00000584216 MMTAG2Q9BU76 263 aaKnown RBP14.42□□□□□ -0.1
COPS3-218ENST00000584216 CCSER1Q9C0I3 900 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 DUS2Q9NX74 493 aaKnown RBP14.42□□□□□ -0.1
COPS3-218ENST00000584216 CPSF3Q9UKF6 684 aaKnown RBP14.42□□□□□ -0.1
COPS3-218ENST00000584216 RALYQ9UKM9 306 aaKnown RBP14.42□□□□□ -0.1
COPS3-218ENST00000584216 PCDHB6Q9Y5E3 794 aa14.42□□□□□ -0.1
COPS3-218ENST00000584216 A0A0B4J269 797 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 K7ENM7 598 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 NFICP08651 508 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 NMT1P30419 496 aaKnown RBP14.41□□□□□ -0.1
COPS3-218ENST00000584216 IFNAR2P48551 515 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 SLC12A3P55017 1021 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 RPL10AP62906 217 aaKnown RBP14.41□□□□□ -0.1
COPS3-218ENST00000584216 FAM160A1Q05DH4 1040 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 PSMD2Q13200 908 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 COL9A2Q14055 689 aaPredicted RBP14.41□□□□□ -0.1
COPS3-218ENST00000584216 MTF1Q14872 753 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 SV2CQ496J9 727 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 PMS2CLQ68D20 193 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 TXNDC8Q6A555 127 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 CYP2U1Q7Z449 544 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 CHFRQ96EP1 664 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 ZNF560Q96MR9 790 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 TMEM206Q9H813 350 aa14.41□□□□□ -0.1
COPS3-218ENST00000584216 MAGED2Q9UNF1 606 aaPredicted RBP14.41□□□□□ -0.1
COPS3-218ENST00000584216 TRAV19A0A0A6YYK7 116 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 DCLK1O15075 740 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 SLC26A4O43511 780 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 USP17L7P0C7H9 530 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 HMGA1P17096 107 aaKnown RBP14.4□□□□□ -0.1
COPS3-218ENST00000584216 PNPLA4P41247 253 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 TOB1P50616 345 aaPredicted RBP14.4□□□□□ -0.1
COPS3-218ENST00000584216 PDE6CP51160 858 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 POU5F1Q01860 360 aaKnown RBP14.4□□□□□ -0.1
COPS3-218ENST00000584216 LMAN2Q12907 356 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 SLFN12LQ6IEE8 588 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 TMEM150AQ86TG1 271 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 MYCT1Q8N699 235 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 FSIP1Q8NA03 581 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
COPS3-218ENST00000584216 SLC32A1Q9H598 525 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 PARVGQ9HBI0 331 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 FBRSL1Q9HCM7 1045 aaKnown RBP14.4□□□□□ -0.1
COPS3-218ENST00000584216 ABCB6Q9NP58 842 aa14.4□□□□□ -0.1
COPS3-218ENST00000584216 CNOT1A5YKK6 2376 aaKnown RBP14.4□□□□□ -0.1
COPS3-218ENST00000584216 KPNA7A9QM74 516 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 GIPC1O14908 333 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
COPS3-218ENST00000584216 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 FAM13AO94988 1023 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 CKMP06732 381 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 DPP6P42658 865 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 ACAP1Q15027 740 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 IL17AQ16552 155 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 RILPL1Q5EBL4 403 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 WSCD1Q658N2 575 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 LMBRD2Q68DH5 695 aaPredicted RBP14.39□□□□□ -0.11
COPS3-218ENST00000584216 LRRTM3Q86VH5 581 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 NT5DC4Q86YG4 428 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 TRMT2BQ96GJ1 504 aaKnown RBP14.39□□□□□ -0.11
COPS3-218ENST00000584216 CNOT6LQ96LI5 555 aaKnown RBP14.39□□□□□ -0.11
COPS3-218ENST00000584216 ZSCAN31Q96LW9 406 aaPredicted RBP14.39□□□□□ -0.11
COPS3-218ENST00000584216 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.39□□□□□ -0.11
COPS3-218ENST00000584216 DPP3Q9NY33 737 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 WASF3Q9UPY6 502 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 KIF3AQ9Y496 699 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 CACNA1GO43497 2377 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 FAM208BQ5VWN6 2430 aa14.39□□□□□ -0.11
COPS3-218ENST00000584216 TRAK2O60296 914 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 NFATC1O95644 943 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 RDXP35241 583 aaKnown RBP14.38□□□□□ -0.11
COPS3-218ENST00000584216 ATP2C1P98194 919 aaPredicted RBP14.38□□□□□ -0.11
COPS3-218ENST00000584216 USP4Q13107 963 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 ZNF77Q15935 545 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 ADALQ6DHV7 355 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 TTC16Q8NEE8 873 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 SPACA7Q96KW9 195 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 MYRFLQ96LU7 910 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 PNMA5Q96PV4 448 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 REEP2Q9BRK0 252 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 PI4K2AQ9BTU6 479 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 SCNM1Q9BWG6 230 aa14.38□□□□□ -0.11
COPS3-218ENST00000584216 NUSAP1Q9BXS6 441 aaKnown RBP14.38□□□□□ -0.11
COPS3-218ENST00000584216 TRPC7Q9HCX4 862 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms