RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 TPCN1Q9ULQ1 816 aa4.84□□□□□ -1.63
SKA2-210ENST00000584089 USP19O94966 1318 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 A0A087WWL8 130 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 BTN3A1O00481 513 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 KIF3BO15066 747 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 DCLK1O15075 740 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 MPPED1O15442 326 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 TBC1D4O60343 1298 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 PPP3CBP16298 524 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 TYRP1P17643 537 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 RHCEP18577 417 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 CD6P30203 668 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 HNRNPMP52272 730 aaKnown RBP eCLIP4.83□□□□□ -1.64
SKA2-210ENST00000584089 ZNF134P52741 427 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 WNT3P56703 355 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 LOXL3P58215 753 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 MRPS35P82673 323 aaKnown RBP4.83□□□□□ -1.64
SKA2-210ENST00000584089 RHDQ02161 417 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 ITIH3Q06033 890 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 POLD3Q15054 466 aaPredicted RBP4.83□□□□□ -1.64
SKA2-210ENST00000584089 KIAA0753Q2KHM9 967 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 NBPF8Q3BBV2 869 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 RBM20Q5T481 1227 aaKnown RBP4.83□□□□□ -1.64
SKA2-210ENST00000584089 RNF220Q5VTB9 566 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 SFRP4Q6FHJ7 346 aaPredicted RBP4.83□□□□□ -1.64
SKA2-210ENST00000584089 PPP4R4Q6NUP7 873 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 FAM109AQ8N4B1 249 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 DNAJC5GQ8N7S2 189 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 TOR1AIP2Q8NFQ8 470 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 TTC17Q96AE7 1141 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 FBXL20Q96IG2 436 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 AMBRA1Q9C0C7 1298 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 TTYH3Q9C0H2 523 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 LRIT1Q9P2V4 623 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 PAXBP1Q9Y5B6 917 aa4.83□□□□□ -1.64
SKA2-210ENST00000584089 TBX3O15119 743 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 MGEA5O60502 916 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 PXNP49023 591 aaPredicted RBP4.82□□□□□ -1.64
SKA2-210ENST00000584089 COL10A1Q03692 680 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 CTBP1Q13363 440 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 RAB32Q13637 225 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 GALEQ14376 348 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 ZNF169Q14929 603 aaPredicted RBP4.82□□□□□ -1.64
SKA2-210ENST00000584089 ERCC6LQ2NKX8 1250 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 OLFML1Q6UWY5 402 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 TMEM108Q6UXF1 575 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 SLC15A4Q8N697 577 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 GPR150Q8NGU9 434 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 MYCBPAPQ8TBZ2 947 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 FAM136AQ96C01 138 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 APIPQ96GX9 242 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 PTDSS2Q9BVG9 487 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 ACTRT3Q9BYD9 372 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 TPSD1Q9BZJ3 242 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 ZNF518BQ9C0D4 1074 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 LRRC27Q9C0I9 530 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 BHMT2Q9H2M3 363 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 SMURF2Q9HAU4 748 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 GEMIN8Q9NWZ8 242 aaKnown RBP4.82□□□□□ -1.64
SKA2-210ENST00000584089 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
SKA2-210ENST00000584089 SALL3Q9BXA9 1300 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 CCDC151A5D8V7 595 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 LMNAP02545 664 aaKnown RBP4.81□□□□□ -1.64
SKA2-210ENST00000584089 MYF5P13349 255 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 PEX2P28328 305 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
SKA2-210ENST00000584089 CXCR5P32302 372 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 SUMO3P55854 103 aaPredicted RBP4.81□□□□□ -1.64
SKA2-210ENST00000584089 LILRA4P59901 499 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 SATB1Q01826 763 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 CNGA2Q16280 664 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 SLC44A4Q53GD3 710 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 VPS53Q5VIR6 699 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 ICE2Q659A1 982 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 KAZNQ674X7 775 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 TSHZ1Q6ZSZ6 1077 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 GAS2L3Q86XJ1 694 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 TIFAQ96CG3 184 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 PDLIM2Q96JY6 352 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 MESP1Q9BRJ9 268 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 ALG8Q9BVK2 526 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 SLITRK6Q9H5Y7 841 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 DDX21Q9NR30 783 aaKnown RBP eCLIP4.81□□□□□ -1.64
SKA2-210ENST00000584089 KLC4Q9NSK0 619 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 FOXJ2Q9P0K8 574 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 CPNE7Q9UBL6 633 aa4.81□□□□□ -1.64
SKA2-210ENST00000584089 POLR2AP24928 1970 aaKnown RBP4.81□□□□□ -1.64
SKA2-210ENST00000584089 TRIM43BA6NCK2 446 aa4.8□□□□□ -1.64
SKA2-210ENST00000584089 ORC4O43929 436 aa4.8□□□□□ -1.64
SKA2-210ENST00000584089 HMGB1P09429 215 aaKnown RBP4.8□□□□□ -1.64
SKA2-210ENST00000584089 BRAFP15056 766 aa4.8□□□□□ -1.64
SKA2-210ENST00000584089 LRPAP1P30533 357 aa4.8□□□□□ -1.64
SKA2-210ENST00000584089 RARRES1P49788 294 aa4.8□□□□□ -1.64
SKA2-210ENST00000584089 SEMA5AQ13591 1074 aa4.8□□□□□ -1.64
SKA2-210ENST00000584089 HLTFQ14527 1009 aaKnown RBP eCLIP4.8□□□□□ -1.64
SKA2-210ENST00000584089 PRR16Q569H4 304 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms