RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 ARID5AQ03989 594 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 TMEM62Q0P6H9 643 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 BIRC3Q13489 604 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 CUL2Q13617 745 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 ARHGAP44Q17R89 818 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 CCDC122Q5T0U0 273 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 UBXN11Q5T124 520 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 ALKBH5Q6P6C2 394 aaKnown RBP12.76□□□□□ -0.37
GGA3-217ENST00000583667 SUMF1Q8NBK3 374 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 TMEM40Q8WWA1 233 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
GGA3-217ENST00000583667 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
GGA3-217ENST00000583667 AGPAT1Q99943 283 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 IMPG2Q9BZV3 1241 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 XYLT2Q9H1B5 865 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 APOBEC3GQ9HC16 384 aaKnown RBP12.76□□□□□ -0.37
GGA3-217ENST00000583667 LZTFL1Q9NQ48 299 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
GGA3-217ENST00000583667 NOCTQ9UK39 431 aaKnown RBP12.76□□□□□ -0.37
GGA3-217ENST00000583667 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.76□□□□□ -0.37
GGA3-217ENST00000583667 A0A0A6YYK5 440 aaPredicted RBP12.75□□□□□ -0.37
GGA3-217ENST00000583667 A0A0U1RQJ8 604 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 CHRNA1P02708 482 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 KCNE1P15382 129 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
GGA3-217ENST00000583667 LMBRD2Q68DH5 695 aaPredicted RBP12.75□□□□□ -0.37
GGA3-217ENST00000583667 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
GGA3-217ENST00000583667 EPS8L1Q8TE68 723 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 ATRIPQ8WXE1 791 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
GGA3-217ENST00000583667 KAT5Q92993 513 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 PPP1R16BQ96T49 567 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 POMKQ9H5K3 350 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 CNTN3Q9P232 1028 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 ITGA11Q9UKX5 1188 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
GGA3-217ENST00000583667 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 CDY2AQ9Y6F7 541 aa12.75□□□□□ -0.37
GGA3-217ENST00000583667 GPR182O15218 404 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 ZNF623O75123 536 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 NPTXRO95502 500 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 ABL1P00519 1130 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 CYP11B1P15538 503 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 CHRNB2P17787 502 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 CYP3A5P20815 502 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 TNFAIP3P21580 790 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 FGFR4P22455 802 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 CASQ1P31415 396 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 ZNF132P52740 706 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 YARSP54577 528 aaKnown RBP12.74□□□□□ -0.37
GGA3-217ENST00000583667 MYL6P60660 151 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 TFAMQ00059 246 aaKnown RBP12.74□□□□□ -0.37
GGA3-217ENST00000583667 CDR2Q01850 454 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 TRPC3Q13507 836 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 JADE1Q6IE81 842 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 LNX1Q8TBB1 728 aaPredicted RBP12.74□□□□□ -0.37
GGA3-217ENST00000583667 DDX1Q92499 740 aaKnown RBP12.74□□□□□ -0.37
GGA3-217ENST00000583667 PI4K2AQ9BTU6 479 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.74□□□□□ -0.37
GGA3-217ENST00000583667 NIF3L1Q9GZT8 377 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 CYP3A43Q9HB55 503 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 ERVK-5Q9HDB9 667 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 DNAI1Q9UI46 699 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 GPR179Q6PRD1 2367 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 ASPMQ8IZT6 3477 aa12.74□□□□□ -0.37
GGA3-217ENST00000583667 FANCGO15287 622 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 CYP26A1O43174 497 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 H2AFZP0C0S5 128 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 SP9P0CG40 484 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 PNMA6AP0CW24 399 aaPredicted RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 SRGAP2BP0DMP2 458 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 ERVFC1P60507 584 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 OSTNP61366 133 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 YWHAEP62258 255 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 RBP5P82980 135 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 ZNF569Q5MCW4 686 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 PPP1R2P3Q6NXS1 205 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 H2AFVQ71UI9 128 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 MRPL10Q7Z7H8 261 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 CMTR2Q8IYT2 770 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
GGA3-217ENST00000583667 SECISBP2LQ93073 1101 aaKnown RBP12.73□□□□□ -0.37
GGA3-217ENST00000583667 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms