RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SHC2P98077 582 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 STPG1Q5TH74 334 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 TRIM68Q6AZZ1 485 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 MCTP1Q6DN14 999 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 CAMKK1Q8N5S9 505 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 MAB21L3Q8N8X9 362 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 USP13Q92995 863 aaPredicted RBP14.64□□□□□ -0.07
SS18-222ENST00000582792 FIZ1Q96SL8 496 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 PYM1Q9BRP8 204 aaKnown RBP14.64□□□□□ -0.07
SS18-222ENST00000582792 CCSER1Q9C0I3 900 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 KIF9Q9HAQ2 790 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 TDP1Q9NUW8 608 aa14.64□□□□□ -0.07
SS18-222ENST00000582792 ABI2Q9NYB9 513 aaPredicted RBP14.64□□□□□ -0.07
SS18-222ENST00000582792 OBSL1O75147 1896 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 TCHHQ07283 1943 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 SOBPA7XYQ1 873 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 RNF40O75150 1001 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 EGFP01133 1207 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 HMGA1P17096 107 aaKnown RBP14.63□□□□□ -0.07
SS18-222ENST00000582792 NMT1P30419 496 aaKnown RBP14.63□□□□□ -0.07
SS18-222ENST00000582792 MPLP40238 635 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 ACOT2P49753 483 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 GTF2BQ00403 316 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 AMPD2Q01433 879 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 BFSP1Q12934 665 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 DHX8Q14562 1220 aaKnown RBP14.63□□□□□ -0.07
SS18-222ENST00000582792 WSCD1Q658N2 575 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 DCP1BQ8IZD4 617 aaKnown RBP14.63□□□□□ -0.07
SS18-222ENST00000582792 RIN3Q8TB24 985 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 LRRC15Q8TF66 581 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 AK8Q96MA6 479 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 DPP3Q9NY33 737 aa14.63□□□□□ -0.07
SS18-222ENST00000582792 ZNF638Q14966 1978 aaKnown RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 ANKRD63C9JTQ0 380 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 ARSAP15289 507 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 DRD1P21728 446 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 POU5F1Q01860 360 aaKnown RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 ZNF268Q14587 947 aaPredicted RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 PDGFRLQ15198 375 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 PLK5Q496M5 336 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 FBXO43Q4G163 708 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 TXNDC8Q6A555 127 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 ADALQ6DHV7 355 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 SLFN12LQ6IEE8 588 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 CC2D1AQ6P1N0 951 aaPredicted RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 MRPS31Q92665 395 aaKnown RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 CALML4Q96GE6 196 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 SMOC1Q9H4F8 434 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 FBRSL1Q9HCM7 1045 aaKnown RBP14.62□□□□□ -0.07
SS18-222ENST00000582792 VPS45Q9NRW7 570 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 BLOC1S4Q9NUP1 217 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 TMLHEQ9NVH6 421 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 PCDHB5Q9Y5E4 795 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 STYXL1Q9Y6J8 313 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 ATG2BQ96BY7 2078 aa14.62□□□□□ -0.07
SS18-222ENST00000582792 KPNA7A9QM74 516 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 TISP43B9A030 160 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 CSH1P0DML2 217 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 CSH2P0DML3 217 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 SYT1P21579 422 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 UBA7P41226 1012 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 GALK1P51570 392 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 MCM6Q14566 821 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 SV2CQ496J9 727 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 MON1AQ86VX9 555 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 EXOC4Q96A65 974 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 HHIPQ96QV1 700 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 P2RY13Q9BPV8 354 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 LSM14BQ9BX40 385 aaKnown RBP14.61□□□□□ -0.07
SS18-222ENST00000582792 DUSP15Q9H1R2 295 aaPredicted RBP14.61□□□□□ -0.07
SS18-222ENST00000582792 ST6GALNAC4Q9H4F1 302 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 ZHX3Q9H4I2 956 aa14.61□□□□□ -0.07
SS18-222ENST00000582792 POLR3BQ9NW08 1133 aaPredicted RBP14.61□□□□□ -0.07
SS18-222ENST00000582792 AGO2Q9UKV8 859 aaKnown RBP14.61□□□□□ -0.07
SS18-222ENST00000582792 TBCAO75347 108 aaKnown RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 PRPF40AO75400 957 aaKnown RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 TADA3O75528 432 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 KCNK5O95279 499 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 KRT18P05783 430 aaKnown RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 PLCG1P19174 1290 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 GJA4P35212 333 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 GPR15P49685 360 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 TSPY1Q01534 308 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 MTF1Q14872 753 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 KARSQ15046 597 aaKnown RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 NFE2Q16621 373 aaPredicted RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 ZC2HC1CQ53FD0 456 aaPredicted RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 RNF43Q68DV7 783 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 NAIF1Q69YI7 327 aaPredicted RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 CRELD2Q6UXH1 353 aaPredicted RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 SYT13Q7L8C5 426 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 EFCAB13Q8IY85 973 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 CPA6Q8N4T0 437 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 STKLD1Q8NE28 680 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 RPLP0P6Q8NHW5 317 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 LEO1Q8WVC0 666 aaPredicted RBP14.6□□□□□ -0.07
SS18-222ENST00000582792 RAD54LQ92698 747 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
SS18-222ENST00000582792 PI4K2AQ9BTU6 479 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms