RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 STK39Q9UEW8 545 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 PUF60Q9UHX1 559 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 NOCTQ9UK39 431 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 CDH9Q9ULB4 789 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 PCDHGC5Q9Y5F6 944 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 BACE2Q9Y5Z0 518 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 ZNF638Q14966 1978 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 DOCK6Q96HP0 2047 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 PRRC2BQ5JSZ5 2229 aaKnown RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 OR6C75A6NL08 312 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 RFXAPO00287 272 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 FSCN2O14926 492 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 SERPING1P05155 500 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 URODP06132 367 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 PLEKP08567 350 aaPredicted RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 OR4Q2P0C623 313 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 VDRP11473 427 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 CCDC130P13994 396 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 CD19P15391 556 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 CYP11B1P15538 503 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 CHRNB2P17787 502 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 RPL17P18621 184 aaKnown RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 BRD2P25440 801 aaKnown RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 GNA15P30679 374 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 PRKCIP41743 596 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 GSDMDP57764 484 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 BPIFB4P59827 614 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 TSPY1Q01534 308 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 PTK2Q05397 1052 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 PTPN14Q15678 1187 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 MEA1Q16626 185 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 MDH1BQ5I0G3 518 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 INTS6LQ5JSJ4 861 aaKnown RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 TMC7Q7Z402 723 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 OLIG1Q8TAK6 271 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 MYCBPAPQ8TBZ2 947 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 GDPD5Q8WTR4 605 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 SLC20A1Q8WUM9 679 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 ZNF606Q8WXB4 792 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 TNIP3Q96KP6 325 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 CHP1Q99653 195 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 TCF25Q9BQ70 676 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 SYT11Q9BT88 431 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 OXCT2Q9BYC2 517 aaPredicted RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 B3GNT5Q9BYG0 378 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 RXFP1Q9HBX9 757 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 TLR9Q9NR96 1032 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 MRPL17Q9NRX2 175 aaKnown RBP10.14□□□□□ -0.79
RFFL-210ENST00000582308 FAM49BQ9NUQ9 324 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 GTF3C4Q9UKN8 822 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 KIAA1257Q9ULG3 409 aa10.14□□□□□ -0.79
RFFL-210ENST00000582308 REV3LO60673 3130 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 PATJQ8NI35 1801 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 C2orf71A6NGG8 1288 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 HIDE1A8MVS5 230 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 GOLGA6L6A8MZA4 724 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 O00370 1275 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CLDN5O00501 218 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 SOX1O00570 391 aaPredicted RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 THAP12O43422 761 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 LPXNO60711 386 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CSPG5O95196 566 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 VNN2O95498 520 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CFHP08603 1231 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CNPP09543 421 aaKnown RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 CCDC172P0C7W6 258 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 FECHP22830 423 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 SSTR3P32745 418 aaPredicted RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 OR1D2P34982 312 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 IRS1P35568 1242 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 ARPP19P56211 112 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CDK17Q00537 523 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 KLHL30Q0D2K2 578 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 SMC1AQ14683 1233 aaKnown RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 CNGA2Q16280 664 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 SGO2Q562F6 1265 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 PPP1R26Q5T8A7 1209 aaPredicted RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 TAF3Q5VWG9 929 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 PLPP4Q5VZY2 271 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 ARHGAP17Q68EM7 881 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 SLC8B1Q6J4K2 584 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 ZNF571Q7Z3V5 609 aaPredicted RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 FMNL3Q8IVF7 1028 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 FUKQ8N0W3 1084 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 MRPL43Q8N983 215 aaKnown RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 CYFIP2Q96F07 1278 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 PCED1BQ96HM7 432 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 HNRNPABQ99729 332 aaKnown RBP10.13□□□□□ -0.79
RFFL-210ENST00000582308 ZNF576Q9H609 170 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 HAUS4Q9H6D7 363 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 ENTPD7Q9NQZ7 604 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 FNIP2Q9P278 1114 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 ARHGAP20Q9P2F6 1191 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 SSX2IPQ9Y2D8 614 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 IRAK3Q9Y616 596 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 CDY1Q9Y6F8 540 aa10.13□□□□□ -0.79
RFFL-210ENST00000582308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms